Non-Coding RNA Search

Ss1.1-rnca12b_h24.5

Sequence:


               
               TCCCCTCCCTTCTCCACCCCATCCTTTCGTCTTGACTGTCCCCAAATTAAGGCCACAGTA
AATAGGGTAGAAGGAAGCGGAGGACCGACCTAAAGCTGCCAGTTCTTTGTGCGCAAATAC
GAGGACCGTATGTGGGGAGGAGTGATCTGGGTTTGGTCAGCTGCCCCGGGGGCCCAGGCG
GCGATCCAGATGTTCGTTTGCGTGAACCCTCCTTTCTTCTCACTGTTATTAACTTGAGTC
CAGTTGAAGCTTTCCAGCTTTCTTTCAGGCGACAGAGTGTAAATAAACACAACTTCCGTA
CTGCAGCGAGCGGGTTGCGCCCAGAAACCTTTCGCATGCCAGTGTGTCATCCTCATAACC
TACATAGCATCCCTCCCTCATTCCACATGCCTGTCATCTGTGTATTTCTTCTTTGCAATT
TCCCCCCTGTTGTTCTTGCTCTTTGCCAACAGGATTAAATACGTGGAACATCTTAGGCTC
TGTATTGTCTCATTATTAGCTTGTGTGCCTAGAAACCTTCATGGGTCATCATAAGTTGAT
ATCACATTGTAAATTGTTAATACACTAATCATAAATCGTTAAAAAAAAAAAAAAAAAAAA
AAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCCCTCCCTTCTCCACCCCATCCTTTCGTCTTGACTGTCCCCAAATTAAGGCCACAGTA
AATAGGGTAGAAGGAAGCGGAGGACCGACCTAAAGCTGCCAGTTCTTTGTGCGCAAATAC
GAGGACCGTATGTGGGGAGGAGTGATCTGGGTTTGGTCAGCTGCCCCGGGGGCCCAGGCG
GCGATCCAGATGTTCGTTTGCGTGAACCCTCCTTTCTTCTCACTGTTATTAACTTGAGTC
CAGTTGAAGCTTTCCAGCTTTCTTTCAGGCGACAGAGTGTAAATAAACACAACTTCCGTA
CTGCAGCGAGCGGGTTGCGCCCAGAAACCTTTCGCATGCCAGTGTGTCATCCTCATAACC
TACATAGCATCCCTCCCTCATTCCACATGCCTGTCATCTGTGTATTTCTTCTTTGCAATT
TCCCCCCTGTTGTTCTTGCTCTTTGCCAACAGGATTAAATACGTGGAACATCTTAGGCTC
TGTATTGTCTCATTATTAGCTTGTGTGCCTAGAAACCTTCATGGGTCATCATAAGTTGAT
ATCACATTGTAAATTGTTAATACACTAATCATAAATCGTTAAAAAAAAAAAAAAAAAAAA
AAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-581, gnl|bosTau2|chr1 (63067943-63067361)
               

               
               1-581, gnl|Hg17|chr3 (171167716-171168295)
               

               
               1-581, gnl|Mm7|chr3 (30605647-30606181)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-581, gnl|bosTau2|chr1 (63067943-63067361)
               

               
               1-581, gnl|Hg17|chr3 (171167716-171168295)
               

               
               1-581, gnl|Mm7|chr3 (30605647-30606181)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nca (0.136874)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nca (0.136874)

	1-581, gnl\|bosTau2\|chr1 (63067943-63067361)
	1-581, gnl\|Hg17\|chr3 (171167716-171168295)
	1-581, gnl\|Mm7\|chr3 (30605647-30606181)