Ss1.1-rnca13b_a12.5
|
AAATGCGAACTTAGGCTGTTACACAACTGCTGGGGTCTGCTCTCGCCTCCCGCCCGGCAG
TCAGTCAGCGTCGCCGCCGCTGTCGCCGCCTCAGCCTTACCGGGAGTCTCAGGCCCGCCC
CGCCGACGTTTACTCGCGCTTCCGGGAGCCTTCGGGAGCCTCCGGAAGCCCCTGTCCACC
CGCACAGGCCGGTAGCGACCGTCTGCGTCTCCTCGGCGCCCCTCGCCGCCCGCCGCACTC
GCCACTCCTGCCGACATGAGTGGGGACCATCTCCACAACGATTCCCAGATCGAGGCGGAT
TTCCGACTGAATGATTCTCATAAACACAAAGATAAACATAAAGATCGAGAACACCGGCAC
AAAGAACACAAGAAGGACAAGGAGAAGGACCGAGAAAAGTCCAAGCATAGCAACAGTGAA
CATAAAGATTCTGAAAAGAAACACAAAGAGAAGGAGAAAACCAAACACAAAGATGGAAGT
TCAGAAAAGCATAAAGACAAACACAAAGACAGAGATAAGGAAAAACGAAAGGAAGAAAAG
ATTAGAGCCTCTGGGGATGCAAAAATAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AAATGCGAACTTAGGCTGTTACACAACTGCTGGGGTCTGCTCTCGCCTCCCGCCCGGCAG
TCAGTCAGCGTCGCCGCCGCTGTCGCCGCCTCAGCCTTACCGGGAGTCTCAGGCCCGCCC
CGCCGACGTTTACTCGCGCTTCCGGGAGCCTTCGGGAGCCTCCGGAAGCCCCTGTCCACC
CGCACAGGCCGGTAGCGACCGTCTGCGTCTCCTCGGCGCCCCTCGCCGCCCGCCGCACTC
GCCACTCCTGCCGACATGAGTGGGGACCATCTCCACAACGATTCCCAGATCGAGGCGGAT
TTCCGACTGAATGATTCTCATAAACACAAAGATAAACATAAAGATCGAGAACACCGGCAC
AAAGAACACAAGAAGGACAAGGAGAAGGACCGAGAAAAGTCCAAGCATAGCAACAGTGAA
CATAAAGATTCTGAAAAGAAACACAAAGAGAAGGAGAAAACCAAACACAAAGATGGAAGT
TCAGAAAAGCATAAAGACAAACACAAAGACAGAGATAAGGAAAAACGAAAGGAAGAAAAG
ATTAGAGCCTCTGGGGATGCAAAAATAAAAAAAAAA
|
|
1-288, gnl|bosTau2|chr13 (51263823-51264085) |
|
1-288, gnl|Hg17|chr20 (39090877-39091154) |
|
1-288, gnl|Mm7|chr2 (160386872-160387152) |
| |
|
413-540, gnl|bosTau2|chr13 (51317717-51317844) |
|
413-540, gnl|canFam2|chr24 (32094717-32094973) |
|
413-540, gnl|dasNov1|scaffold_1576 (121123-120873) |
|
413-540, gnl|hg17|chr20 (39138176-39138406) |
|
413-540, gnl|Hg17|chr20 (39138221-39138348) |
|
413-540, gnl|loxAfr1|scaffold_8118 (38796-39017) |
|
413-540, gnl|mm7|chr2 (160423493-160423728) |
|
413-540, gnl|Mm7|chr2 (160423537-160423664) |
|
413-540, gnl|monDom2|scaffold_6 (6607366-6607594) |
|
413-540, gnl|oryCun1|scaffold_174891 (125097-125340) |
|
413-540, gnl|panTro1|chr21 (41574641-41574871) |
|
413-540, gnl|rheMac2|chr10 (23380670-23380441) |
|
413-540, gnl|rn3|chr3 (151370273-151370514) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-288, gnl|bosTau2|chr13 (51263823-51264085) |
|
1-288, gnl|Hg17|chr20 (39090877-39091154) |
|
1-288, gnl|Mm7|chr2 (160386872-160387152) |
| |
|
413-540, gnl|bosTau2|chr13 (51317717-51317844) |
|
413-540, gnl|canFam2|chr24 (32094717-32094973) |
|
413-540, gnl|dasNov1|scaffold_1576 (121123-120873) |
|
413-540, gnl|hg17|chr20 (39138176-39138406) |
|
413-540, gnl|Hg17|chr20 (39138221-39138348) |
|
413-540, gnl|loxAfr1|scaffold_8118 (38796-39017) |
|
413-540, gnl|mm7|chr2 (160423493-160423728) |
|
413-540, gnl|Mm7|chr2 (160423537-160423664) |
|
413-540, gnl|monDom2|scaffold_6 (6607366-6607594) |
|
413-540, gnl|oryCun1|scaffold_174891 (125097-125340) |
|
413-540, gnl|panTro1|chr21 (41574641-41574871) |
|
413-540, gnl|rheMac2|chr10 (23380670-23380441) |
|
413-540, gnl|rn3|chr3 (151370273-151370514) |
|
nca (0.273748) |
|
pan (0.23596) |
|
nlu (0.191681) |
|
sag (0.182715) |
|
fty (0.17584) |
|
nco (0.161734) |
|
ute (0.132784) |
|
thg (0.126791) |
|
eep (0.122564) |
|
spc (0.113366) |
|
nca (0.273748) |
|
pan (0.23596) |
|
nlu (0.191681) |
|
sag (0.182715) |
|
fty (0.17584) |
|
nco (0.161734) |
|
ute (0.132784) |
|
thg (0.126791) |
|
eep (0.122564) |
|
spc (0.113366) |
