Non-Coding RNA Search

Ss1.1-rnca13b_a16.5

Sequence:


               
               AAATATATTTCTGACACCTCAAATGTATGTAATAGGTAATACAAATCACTATTTGTATTA
AAATTAGGAAAACCCCAGCACAAACTGATTATAATTTTGTCAATTCTGTTTTGGTATTTC
AGATTTCCATATTTGGAATGAAAGAATGAGAAATTTGCTATTCCTTTTTAATACCTATGA
AAATGTGATATAGAAATGTTATTGTGCATTTTAATATTACTTTCCAAGGATGTCCAAGTG
CTTTATATTACTTTAAGAATCTTTAGTTGATAATAGGAACAAGGTGTAGGGGAATTAAAA
CTTATTTTTATTTAATATACCAATGGGTTAATCTGTTTTCAGTTTTTTTGTTTTGTTTTT
TATCAAAACAAGGTATGTCTTATTTTCTCTCTTTGGTTTTTAAAAGTTAGTGCTTCATGA
AATTAGTGTTAGTTCATAAATTTTTTAGAAAGTTCCTTTCTTGTTGATTTAAATTGCTAC
AAAAGGAATAAAAGGGAAGCTTTCTATTATTTGAAAACAAGTTGACTTGTTCGTTTCCAT
TTTATCTACTTAATGATTTGGAGCCAGTATCATTTTATTCTATTAGTGAATGTTTGTGTC
TCCCCATCCCCACCGACAAATTCATACGTTGAAGTCCCCCAATATGATGACATTTGGAGA
TGGGGCCTTTGGAAGGTAATTAGGGTTAATAGGTCATGAGAGTGGGGCCCTCATGATAGG
ATTACTGTCCTCATAAGAAGAAACACCAGAGAGCTTGCTCACTCTCTGCCCACTCTTTGA
GGATGCAGTGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATATATTTCTGACACCTCAAATGTATGTAATAGGTAATACAAATCACTATTTGTATTA
AAATTAGGAAAACCCCAGCACAAACTGATTATAATTTTGTCAATTCTGTTTTGGTATTTC
AGATTTCCATATTTGGAATGAAAGAATGAGAAATTTGCTATTCCTTTTTAATACCTATGA
AAATGTGATATAGAAATGTTATTGTGCATTTTAATATTACTTTCCAAGGATGTCCAAGTG
CTTTATATTACTTTAAGAATCTTTAGTTGATAATAGGAACAAGGTGTAGGGGAATTAAAA
CTTATTTTTATTTAATATACCAATGGGTTAATCTGTTTTCAGTTTTTTTGTTTTGTTTTT
TATCAAAACAAGGTATGTCTTATTTTCTCTCTTTGGTTTTTAAAAGTTAGTGCTTCATGA
AATTAGTGTTAGTTCATAAATTTTTTAGAAAGTTCCTTTCTTGTTGATTTAAATTGCTAC
AAAAGGAATAAAAGGGAAGCTTTCTATTATTTGAAAACAAGTTGACTTGTTCGTTTCCAT
TTTATCTACTTAATGATTTGGAGCCAGTATCATTTTATTCTATTAGTGAATGTTTGTGTC
TCCCCATCCCCACCGACAAATTCATACGTTGAAGTCCCCCAATATGATGACATTTGGAGA
TGGGGCCTTTGGAAGGTAATTAGGGTTAATAGGTCATGAGAGTGGGGCCCTCATGATAGG
ATTACTGTCCTCATAAGAAGAAACACCAGAGAGCTTGCTCACTCTCTGCCCACTCTTTGA
GGATGCAGTGAG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-505, gnl|bosTau2|chr19 (35565849-35565365)
               

               
               1-505, gnl|Hg17|chr14 (30986425-30985786)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-505, gnl|bosTau2|chr19 (35565849-35565365)
               

               
               1-505, gnl|Hg17|chr14 (30986425-30985786)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

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               ece (0.229305)
               

               
               fty (0.17584)
               

               
               lin (0.145603)
               

               
               nca (0.136874)
               

               
               tra (0.123092)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               fty (0.17584)
               

               
               lin (0.145603)
               

               
               nca (0.136874)
               

               
               tra (0.123092)

	1-505, gnl\|bosTau2\|chr19 (35565849-35565365)
	1-505, gnl\|Hg17\|chr14 (30986425-30985786)

	ece (0.229305)
	fty (0.17584)
	lin (0.145603)
	nca (0.136874)
	tra (0.123092)