Ss1.1-rnca13b_m19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGAGAGCCAGTGCCGGAAGCAGCAGTCACACCTGAGCAGCATCGTCACCCCCGAGGAGCA GGAGTTTGTCAACAACAACGCTCAGGACTACCAGTGGATTGGCTTGAACGACAAGACCAT CGAAGGGGACTTCCGCTGGTCAGATGGACACTCCTTGCAATTTGAGAACTGGCGCCCCAA CCAGCCTGACAACTTCTTCGCCACTGGAGAGGACTGCGTGGTGATGATCTGGCACGAGAA GGGCGAGTGGAATGACGTGCCCTGCAATTACCAGCTGCCCTTCACGTGTAAAAAGGGCAC AGTGGCCTGCGGAGAGCCCCCCGTGGTGGAGCACGCCAGGATCTTCGGGCAGAAGAAGGA CCGGTACGAGATCAATTCCCTGGTGCGGTACCAGTGCACCGAGGGCTTTGTCCAGCGCCA CGTGCCCACCATCCGGTGCCAGCCCAGCGGGCACTGGGAGGAGCCTCGGATCACCTGCAC AGACCCCGCCACCTACAAGCGCAGACTACAGAAGCGGAGCTCACGGTCCCTGCGGAGGAG CCGCCCCAGCACGGGCCCCTGAGAGGGGCTTCCAGGACGTGCCCAGGATGCTGAGCCCAG GAGCCTTGCCAGGCTGACATCCCACACGGATGGTGTCCGCTCCTTGTCGCTTTCTGTCAT ATAAGGAATTCCATTAAAGAAGGAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGAGAGCCAGTGCCGGAAGCAGCAGTCACACCTGAGCAGCATCGTCACCCCCGAGGAGCA GGAGTTTGTCAACAACAACGCTCAGGACTACCAGTGGATTGGCTTGAACGACAAGACCAT CGAAGGGGACTTCCGCTGGTCAGATGGACACTCCTTGCAATTTGAGAACTGGCGCCCCAA CCAGCCTGACAACTTCTTCGCCACTGGAGAGGACTGCGTGGTGATGATCTGGCACGAGAA GGGCGAGTGGAATGACGTGCCCTGCAATTACCAGCTGCCCTTCACGTGTAAAAAGGGCAC AGTGGCCTGCGGAGAGCCCCCCGTGGTGGAGCACGCCAGGATCTTCGGGCAGAAGAAGGA CCGGTACGAGATCAATTCCCTGGTGCGGTACCAGTGCACCGAGGGCTTTGTCCAGCGCCA CGTGCCCACCATCCGGTGCCAGCCCAGCGGGCACTGGGAGGAGCCTCGGATCACCTGCAC AGACCCCGCCACCTACAAGCGCAGACTACAGAAGCGGAGCTCACGGTCCCTGCGGAGGAG CCGCCCCAGCACGGGCCCCTGAGAGGGGCTTCCAGGACGTGCCCAGGATGCTGAGCCCAG GAGCCTTGCCAGGCTGACATCCCACACGGATGGTGTCCGCTCCTTGTCGCTTTCTGTCAT ATAAGGAATTCCATTAAAGAAGGAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 157-302, gnl|bosTau2|chr21 (14838827-14838682) | |
| 157-302, gnl|canFam2|chr3 (54890901-54891086) | |
| 157-302, gnl|danRer3|chr25 (11799927-11799767) | |
| 157-302, gnl|dasNov1|scaffold_90362 (1062-1233) | |
| 157-302, gnl|echTel1|scaffold_274256 (23717-23905) | |
| 157-302, gnl|fr1|chrUn (111147202-111147354) | |
| 157-302, gnl|galGal2|chr10 (13608703-13608540) | |
| 157-302, gnl|hg17|chr15 (87217085-87217274) | |
| 157-302, gnl|Hg17|chr15 (87217115-87217260) | |
| 157-302, gnl|loxAfr1|scaffold_65315 (16560-16750) | |
| 157-302, gnl|mm7|chr7 (74975845-74976034) | |
| 157-302, gnl|Mm7|chr7 (74975875-74976020) | |
| 157-302, gnl|monDom2|scaffold_45 (11637802-11637611) | |
| 157-302, gnl|oryCun1|scaffold_137587 (5141-4952) | |
| 157-302, gnl|panTro1|chr16 (88071810-88071999) | |
| 157-302, gnl|rheMac2|chr7 (68483485-68483674) | |
| 157-302, gnl|rn3|chr1 (134925561-134925751) | |
| 157-302, gnl|tetNig1|chrUn_random (25862106-25861935) | |
| 157-302, gnl|xenTro1|scaffold_130 (1562293-1562125) | |
| 471-695, gnl|bosTau2|chr21 (14837205-14836981) | |
| 471-695, gnl|canFam2|chr3 (54892686-54892979) | |
| 471-695, gnl|dasNov1|scaffold_15075 (19448-19705) | |
| 471-695, gnl|galGal2|chr10 (13606722-13606452) | |
| 471-695, gnl|hg17|chr15 (87218603-87218884) | |
| 471-695, gnl|Hg17|chr15 (87218625-87218851) | |
| 471-695, gnl|loxAfr1|scaffold_200231 (155-434) | |
| 471-695, gnl|mm7|chr7 (74977365-74977633) | |
| 471-695, gnl|Mm7|chr7 (74977385-74977607) | |
| 471-695, gnl|monDom2|scaffold_45 (11634899-11634628) | |
| 471-695, gnl|panTro1|chr16 (88073476-88073756) | |
| 471-695, gnl|rheMac2|chr7 (68485019-68485298) | |
| 471-695, gnl|rn3|chr1 (134927163-134927428) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 157-302, gnl|bosTau2|chr21 (14838827-14838682) | |
| 157-302, gnl|canFam2|chr3 (54890901-54891086) | |
| 157-302, gnl|danRer3|chr25 (11799927-11799767) | |
| 157-302, gnl|dasNov1|scaffold_90362 (1062-1233) | |
| 157-302, gnl|echTel1|scaffold_274256 (23717-23905) | |
| 157-302, gnl|fr1|chrUn (111147202-111147354) | |
| 157-302, gnl|galGal2|chr10 (13608703-13608540) | |
| 157-302, gnl|hg17|chr15 (87217085-87217274) | |
| 157-302, gnl|Hg17|chr15 (87217115-87217260) | |
| 157-302, gnl|loxAfr1|scaffold_65315 (16560-16750) | |
| 157-302, gnl|mm7|chr7 (74975845-74976034) | |
| 157-302, gnl|Mm7|chr7 (74975875-74976020) | |
| 157-302, gnl|monDom2|scaffold_45 (11637802-11637611) | |
| 157-302, gnl|oryCun1|scaffold_137587 (5141-4952) | |
| 157-302, gnl|panTro1|chr16 (88071810-88071999) | |
| 157-302, gnl|rheMac2|chr7 (68483485-68483674) | |
| 157-302, gnl|rn3|chr1 (134925561-134925751) | |
| 157-302, gnl|tetNig1|chrUn_random (25862106-25861935) | |
| 157-302, gnl|xenTro1|scaffold_130 (1562293-1562125) | |
| 471-695, gnl|bosTau2|chr21 (14837205-14836981) | |
| 471-695, gnl|canFam2|chr3 (54892686-54892979) | |
| 471-695, gnl|dasNov1|scaffold_15075 (19448-19705) | |
| 471-695, gnl|galGal2|chr10 (13606722-13606452) | |
| 471-695, gnl|hg17|chr15 (87218603-87218884) | |
| 471-695, gnl|Hg17|chr15 (87218625-87218851) | |
| 471-695, gnl|loxAfr1|scaffold_200231 (155-434) | |
| 471-695, gnl|mm7|chr7 (74977365-74977633) | |
| 471-695, gnl|Mm7|chr7 (74977385-74977607) | |
| 471-695, gnl|monDom2|scaffold_45 (11634899-11634628) | |
| 471-695, gnl|panTro1|chr16 (88073476-88073756) | |
| 471-695, gnl|rheMac2|chr7 (68485019-68485298) | |
| 471-695, gnl|rn3|chr1 (134927163-134927428) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nca (1.23186) | |
| nep (0.183925) | |
| cly (0.120642) |