Ss1.1-rnca18b_o14.5
|
TGTGGCGACATGAAGCTGCTCACCCACAACTTGCTGAGCTCGCATGTGCGGGGGGTGGGG
ACCCGTGGCTTCCCACTGCGTCTCCAGGCCACCGAGGTCCGCATCAACCCCGTCGAGTTC
GAGAGCGCGTTGTGGCGACATGAAGCTGCTCACCCACAACTTGCTGAGCTCGCATGTGCG
GGGGGTGGGGACCCGTGGCTTCCCACTGCGTCTCCAGGCCACCGAGGTCCGCATCAACCC
CGTCGAGTTCAACCCGGACTTCGTGGCGCGTATGATACCCAAAGTAGAGTGGGCGGCGCT
TCTGGAGGCGGCCGACACCTTGCATCTGGTCGAGGTGCCCAAAGAGCCGATTCAGGGATA
CGAGCACGATGAGACATTCCTGAGGAAGATGCACCACGTGTTGCTGGAGGTGGATGTGTT
GGAGGGCACCCTGCAGTGCCCAGAGTCTGGACGTTTATTTCCCATCAGCCGTGGGATCCC
CAATATGCTGCTGACGGATGAGGAAACCAAGACCTAAAACGGTGCCGGGCACCAGTTTGT
CATTCTGTGACCGTGTGTGTTTTTGTGTACATAAGTCTTGTTTGCTAGTTCTGTCCTTTG
TATCCCCGACCCCGGGCCCAGTGACACACCAAACACAGTGTTATTGAGCTCGATATTATA
TTCTTTTTTCTCATTAAAGGTTCAAAACCAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGTGGCGACATGAAGCTGCTCACCCACAACTTGCTGAGCTCGCATGTGCGGGGGGTGGGG
ACCCGTGGCTTCCCACTGCGTCTCCAGGCCACCGAGGTCCGCATCAACCCCGTCGAGTTC
GAGAGCGCGTTGTGGCGACATGAAGCTGCTCACCCACAACTTGCTGAGCTCGCATGTGCG
GGGGGTGGGGACCCGTGGCTTCCCACTGCGTCTCCAGGCCACCGAGGTCCGCATCAACCC
CGTCGAGTTCAACCCGGACTTCGTGGCGCGTATGATACCCAAAGTAGAGTGGGCGGCGCT
TCTGGAGGCGGCCGACACCTTGCATCTGGTCGAGGTGCCCAAAGAGCCGATTCAGGGATA
CGAGCACGATGAGACATTCCTGAGGAAGATGCACCACGTGTTGCTGGAGGTGGATGTGTT
GGAGGGCACCCTGCAGTGCCCAGAGTCTGGACGTTTATTTCCCATCAGCCGTGGGATCCC
CAATATGCTGCTGACGGATGAGGAAACCAAGACCTAAAACGGTGCCGGGCACCAGTTTGT
CATTCTGTGACCGTGTGTGTTTTTGTGTACATAAGTCTTGTTTGCTAGTTCTGTCCTTTG
TATCCCCGACCCCGGGCCCAGTGACACACCAAACACAGTGTTATTGAGCTCGATATTATA
TTCTTTTTTCTCATTAAAGGTTCAAAACCAAAAAAAAAAAAAAAAAAA
|
|
gi|27661288|ref|XP_215167.1| |
Protein identifier
|
gi|27661288|ref|XP_215167.1| |
|
206-316, gnl|bosTau2|chr29 (33425642-33425531) |
|
206-316, gnl|canFam2|chr18 (55781018-55780903) |
|
206-316, gnl|dasNov1|scaffold_149813 (1346-1461) |
|
206-316, gnl|echTel1|scaffold_293960 (6737-6852) |
|
206-316, gnl|fr1|chrUn (49375151-49375040) |
|
206-316, gnl|hg17|chr11 (63841306-63841421) |
|
206-316, gnl|Hg17|chr11 (63841426-63841315) |
|
206-316, gnl|mm7|chr19 (6730336-6730221) |
|
206-316, gnl|Mm7|chr19 (6730202-6730325) |
|
206-316, gnl|oryCun1|scaffold_192238 (48913-48806) |
|
206-316, gnl|panTro1|chr9 (64830329-64830444) |
|
206-316, gnl|rheMac2|chr14 (10110452-10110336) |
|
206-316, gnl|rn3|chr1 (209745610-209745495) |
|
206-316, gnl|tetNig1|chr1 (8063951-8063841) |
|
206-316, gnl|xenTro1|scaffold_684 (676876-676991) |
| |
|
401-693, gnl|bosTau2|chr29 (33425129-33424841) |
|
401-693, gnl|Hg17|chr11 (63841025-63840739) |
|
401-693, gnl|Mm7|chr19 (6730608-6730892) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
206-316, gnl|bosTau2|chr29 (33425642-33425531) |
|
206-316, gnl|canFam2|chr18 (55781018-55780903) |
|
206-316, gnl|dasNov1|scaffold_149813 (1346-1461) |
|
206-316, gnl|echTel1|scaffold_293960 (6737-6852) |
|
206-316, gnl|fr1|chrUn (49375151-49375040) |
|
206-316, gnl|hg17|chr11 (63841306-63841421) |
|
206-316, gnl|Hg17|chr11 (63841426-63841315) |
|
206-316, gnl|mm7|chr19 (6730336-6730221) |
|
206-316, gnl|Mm7|chr19 (6730202-6730325) |
|
206-316, gnl|oryCun1|scaffold_192238 (48913-48806) |
|
206-316, gnl|panTro1|chr9 (64830329-64830444) |
|
206-316, gnl|rheMac2|chr14 (10110452-10110336) |
|
206-316, gnl|rn3|chr1 (209745610-209745495) |
|
206-316, gnl|tetNig1|chr1 (8063951-8063841) |
|
206-316, gnl|xenTro1|scaffold_684 (676876-676991) |
| |
|
401-693, gnl|bosTau2|chr29 (33425129-33424841) |
|
401-693, gnl|Hg17|chr11 (63841025-63840739) |
|
401-693, gnl|Mm7|chr19 (6730608-6730892) |
|
hlv (0.835538) |
|
cag (0.604778) |
|
med (0.58126) |
|
ecc (0.575175) |
|
cov (0.528611) |
|
ton (0.526501) |
|
mcp (0.511945) |
|
pgl (0.473934) |
|
cli (0.458435) |
|
jca (0.45584) |
|
amn (0.417711) |
|
nmm (0.398406) |
|
eje (0.395335) |
|
elu (0.385356) |
|
cly (0.361925) |
|
eye (0.341006) |
|
cte (0.29274) |
|
lnt (0.284616) |
|
cga (0.279096) |
|
nca (0.273748) |
|
fce (0.271592) |
|
eru (0.240096) |
|
ebs (0.236602) |
|
pan (0.23596) |
|
cbl (0.229595) |
|
hea (0.204499) |
|
fcc (0.197785) |
|
col (0.195008) |
|
nep (0.183925) |
|
gul (0.177588) |
|
fbs (0.175346) |
|
duo (0.172801) |
|
nje (0.16592) |
|
cki (0.165235) |
|
nco (0.161734) |
|
mga (0.160205) |
|
pty (0.142714) |
|
sug (0.127291) |
|
eep (0.122564) |
|
hlv (0.835538) |
|
cag (0.604778) |
|
med (0.58126) |
|
ecc (0.575175) |
|
cov (0.528611) |
|
ton (0.526501) |
|
mcp (0.511945) |
|
pgl (0.473934) |
|
cli (0.458435) |
|
jca (0.45584) |
|
amn (0.417711) |
|
nmm (0.398406) |
|
eje (0.395335) |
|
elu (0.385356) |
|
cly (0.361925) |
|
eye (0.341006) |
|
cte (0.29274) |
|
lnt (0.284616) |
|
cga (0.279096) |
|
nca (0.273748) |
|
fce (0.271592) |
|
eru (0.240096) |
|
ebs (0.236602) |
|
pan (0.23596) |
|
cbl (0.229595) |
|
hea (0.204499) |
|
fcc (0.197785) |
|
col (0.195008) |
|
nep (0.183925) |
|
gul (0.177588) |
|
fbs (0.175346) |
|
duo (0.172801) |
|
nje (0.16592) |
|
cki (0.165235) |
|
nco (0.161734) |
|
mga (0.160205) |
|
pty (0.142714) |
|
sug (0.127291) |
|
eep (0.122564) |
