Non-Coding RNA Search

Ss1.1-rnca23b_l9.5

Sequence:


               
               CAGGACTGAGGAGGGTGCAGTTTGTGGTGACAGTCCGCTGTGATTGACATTCCTTTGATT
ATCCCGGACTGAATCTTCGAGGGAAGACTGCCAGATGCAGCTTATTATGGACACGTGGAC
TGTTTCTGGGAAGCGTGGGGTGTCGCTTTTCTACAAGCTTTCCTGTCTGAAGTGAAAAAT
TTACCTAAGTTCTAATAGAGTTCTCAGCTGTTGAGGAAAATCTTTAAGAGGTGAAGCTGA
GCTCAGAGCTACATGTACAGTTTATCTTATCAAGATGGGTGGAAGTAAAGCAATTTAAAG
GAAATTGAAGACCACAAATCTTAATGACTGAAATACACTGTATTGTTCACACCAAAGCAT
AAGTGTTTGGAGAAAGACCTTTGCTGTTCAGCAAAATCATGATGGAGGCAGAAGAACAGC
AGTCATGGAAGACAACCTTTTACTCAAAATTACCTAAAGTGGAACTTCATGCTCACTTGA
ATGGATCCATTAGTTCTAATACCATAAAGAAATTAATAACCAAGAAGCCAGGTCTTAAAA
TCCATGATCAGATGACTATGATTGACAAGGGAAAGAAAAGAACTTTAGAAGAATGTTTCC
AGATGTTTCCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGACTGAGGAGGGTGCAGTTTGTGGTGACAGTCCGCTGTGATTGACATTCCTTTGATT
ATCCCGGACTGAATCTTCGAGGGAAGACTGCCAGATGCAGCTTATTATGGACACGTGGAC
TGTTTCTGGGAAGCGTGGGGTGTCGCTTTTCTACAAGCTTTCCTGTCTGAAGTGAAAAAT
TTACCTAAGTTCTAATAGAGTTCTCAGCTGTTGAGGAAAATCTTTAAGAGGTGAAGCTGA
GCTCAGAGCTACATGTACAGTTTATCTTATCAAGATGGGTGGAAGTAAAGCAATTTAAAG
GAAATTGAAGACCACAAATCTTAATGACTGAAATACACTGTATTGTTCACACCAAAGCAT
AAGTGTTTGGAGAAAGACCTTTGCTGTTCAGCAAAATCATGATGGAGGCAGAAGAACAGC
AGTCATGGAAGACAACCTTTTACTCAAAATTACCTAAAGTGGAACTTCATGCTCACTTGA
ATGGATCCATTAGTTCTAATACCATAAAGAAATTAATAACCAAGAAGCCAGGTCTTAAAA
TCCATGATCAGATGACTATGATTGACAAGGGAAAGAAAAGAACTTTAGAAGAATGTTTCC
AGATGTTTCCAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|26339586|dbj|BAC33464.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|26339586|dbj|BAC33464.1|

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               223-462, gnl|bosTau2|chr21 (37512582-37512815)
               

               
               223-462, gnl|Hg17|chr15 (41414427-41414661)
               

               
               223-462, gnl|Mm7|chr2 (120882934-120883153)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               223-462, gnl|bosTau2|chr21 (37512582-37512815)
               

               
               223-462, gnl|Hg17|chr15 (41414427-41414661)
               

               
               223-462, gnl|Mm7|chr2 (120882934-120883153)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               ste (0.270416)
               

               
               nca (0.136874)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ste (0.270416)
               

               
               nca (0.136874)

	223-462, gnl\|bosTau2\|chr21 (37512582-37512815)
	223-462, gnl\|Hg17\|chr15 (41414427-41414661)
	223-462, gnl\|Mm7\|chr2 (120882934-120883153)