Non-Coding RNA Search

Ss1.1-rnca25b_l15.5

Sequence:


               
               CGTCATTGAGGAGGTGACAGAGGGCACCCTGAACCGCAGCCGCAGCCTCAGCGTGCTGGT
GCTCAGCAACAACCTGCTCCAGGAAGACCGGCTGGCGCCCCGTGCCTGGATCGATCTCCC
GAAGCTGGAGGCTCTCGACCTCTCCTACAACCGGCTGGTGCACGTGCCCTCCTTCCTGCC
CCGGGGCCTCCGCCGCCTGACCCTGCACCACAACCGCATCGAGCGCATCCCCGGCTACGT
GTTCGCGCACATGAAGCCGGGCCTGGAGTTCCTGCACCTGTCCCACAACAGCCTGCGCGC
CGACGGCATCCACGGAGCGTCCTTCCTGGGCCTACAGGCCTCCCTGGCTGAGTTGCTGCT
GGACCACAACCAGCTGCAGGCTGTCCCTCGAGGCCTCCTGGGCCTCAGGGCGCTGCAGGT
GCTGCGCCTGAGCCATAACAAGATTAGACACGTGCCCCTGAATTCCATCTGTGACACACG
CGTGGCCCAGGACTCCAACCTCATCTCCACGCGCCTAGAGAACAACCTCATCGACCGGCG
CCGCATCCCACCCACCGCCTTCTCCTGCATCCGGGCCTACCACAGCGTGGTCCTCCGGCC
GCAGCAGGGGGAGGGGGAGGGGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGTCATTGAGGAGGTGACAGAGGGCACCCTGAACCGCAGCCGCAGCCTCAGCGTGCTGGT
GCTCAGCAACAACCTGCTCCAGGAAGACCGGCTGGCGCCCCGTGCCTGGATCGATCTCCC
GAAGCTGGAGGCTCTCGACCTCTCCTACAACCGGCTGGTGCACGTGCCCTCCTTCCTGCC
CCGGGGCCTCCGCCGCCTGACCCTGCACCACAACCGCATCGAGCGCATCCCCGGCTACGT
GTTCGCGCACATGAAGCCGGGCCTGGAGTTCCTGCACCTGTCCCACAACAGCCTGCGCGC
CGACGGCATCCACGGAGCGTCCTTCCTGGGCCTACAGGCCTCCCTGGCTGAGTTGCTGCT
GGACCACAACCAGCTGCAGGCTGTCCCTCGAGGCCTCCTGGGCCTCAGGGCGCTGCAGGT
GCTGCGCCTGAGCCATAACAAGATTAGACACGTGCCCCTGAATTCCATCTGTGACACACG
CGTGGCCCAGGACTCCAACCTCATCTCCACGCGCCTAGAGAACAACCTCATCGACCGGCG
CCGCATCCCACCCACCGCCTTCTCCTGCATCCGGGCCTACCACAGCGTGGTCCTCCGGCC
GCAGCAGGGGGAGGGGGAGGGGGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61808927|ref|XP_596290.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61808927|ref|XP_596290.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               121-447, gnl|bosTau2|chrX (13775169-13774843)
               

               
               121-447, gnl|Hg17|chrX (152272075-152272401)
               

               
               121-447, gnl|Mm7|chr13 (49013942-49014268)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               121-447, gnl|bosTau2|chrX (13775169-13774843)
               

               
               121-447, gnl|Hg17|chrX (152272075-152272401)
               

               
               121-447, gnl|Mm7|chr13 (49013942-49014268)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nca (0.273748)
               

               
               ebs (0.118301)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nca (0.273748)
               

               
               ebs (0.118301)

	121-447, gnl\|bosTau2\|chrX (13775169-13774843)
	121-447, gnl\|Hg17\|chrX (152272075-152272401)
	121-447, gnl\|Mm7\|chr13 (49013942-49014268)