Ss1.1-rnca32b_c21.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCTCTCACGGGGTTTCAGAGCACAGATGCCCAAAGCACAAAAGCAGTTTTCCCCTGGGG TGGGAGGAAGCAAGAGACTTGGTACCTATTTGGTATGTGTATAATAATTGGAGATGTTTT TAATTATTTGGATGGCTGGAATAAAGCATGTGGAAATGACCCAAAAAAAAAAAAAAAAAA CTCGAGCGGCACGAGGCCACAAGGGTGCGCATGAATGTCCTGGCCGATGCCCTCAAGAGC ATCAACAATGCCGAAAAGAGAGGCAAACGCCAGGTTCTTATAAGGCCGTGCTCCAAAGTC ATCGTCAGGTTTCTAACTGTGATGATGAAGCATGGTTACATGGGCGAATTGGAAATCATC GACGATCATAGAGCTGGGAAAATGGTGGTGAACCTCACAGGCAGGCTAAATAAGTGTGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCTCTCACGGGGTTTCAGAGCACAGATGCCCAAAGCACAAAAGCAGTTTTCCCCTGGGG TGGGAGGAAGCAAGAGACTTGGTACCTATTTGGTATGTGTATAATAATTGGAGATGTTTT TAATTATTTGGATGGCTGGAATAAAGCATGTGGAAATGACCCAAAAAAAAAAAAAAAAAA CTCGAGCGGCACGAGGCCACAAGGGTGCGCATGAATGTCCTGGCCGATGCCCTCAAGAGC ATCAACAATGCCGAAAAGAGAGGCAAACGCCAGGTTCTTATAAGGCCGTGCTCCAAAGTC ATCGTCAGGTTTCTAACTGTGATGATGAAGCATGGTTACATGGGCGAATTGGAAATCATC GACGATCATAGAGCTGGGAAAATGGTGGTGAACCTCACAGGCAGGCTAAATAAGTGTGGA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 196-350, + strand, RNAz p=0.828633 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 196-350, + strand, RNAz p=0.828633 |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 1-165, gnl|bosTau2|chr19 (29190210-29190376) | |
| 1-165, gnl|Hg17|chr17 (45616626-45616461) | |
| 1-165, gnl|Mm7|chr11 (95061926-95062081) | |
| 196-420, gnl|bosTau2|chr10 (59314650-59314874) | |
| 196-420, gnl|Hg17|chr8 (30094843-30094615) | |
| 196-420, gnl|Mm7|chr11 (6125045-6124821) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-165, gnl|bosTau2|chr19 (29190210-29190376) | |
| 1-165, gnl|Hg17|chr17 (45616626-45616461) | |
| 1-165, gnl|Mm7|chr11 (95061926-95062081) | |
| 196-420, gnl|bosTau2|chr10 (59314650-59314874) | |
| 196-420, gnl|Hg17|chr8 (30094843-30094615) | |
| 196-420, gnl|Mm7|chr11 (6125045-6124821) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| nca (0.136874) | |
| ese (0.126502) | |
| med (0.116252) | |
| jca (0.11396) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nca (0.136874) | |
| ese (0.126502) | |
| med (0.116252) | |
| jca (0.11396) |