Ss1.1-rnca33b_i10.5
|
GGGCCTGGAAGTTAGGGCAGAGGCATGGAGCTTTTGTTGGGCTCAGGACAGAGGTGGGGG
TACCTTTGACATCTCTGCCAGCTTTTCATAGAAGCCAGCCCATTAGAAGCCATTTCACCT
TTAAGATCTGAGTAGGACAATGGTTACGATGCCGGTAATCAGCTGAACCATTGCCAGTGA
CCGTCTGGGCTGCTGGACTGGTGCCAGCCCTGCAGCTGGGCAGGCAATCTGCGTCAGCGA
TTTTATCAGCCTGGGCTGTGGCACCCAGGCACAGTGCAGAGAAAGCTGGCCGTCAGCAGT
CCTGGGGAGCGGGCCAGGCGCTCATCCACGAGTCAGCACATCCCCCCCCCGGGCAGGGGG
AGGGAATGGGGCCTCAGCAGTGGCCCGCTGTGTGAGAAGGGGCCTGCACAGCCCAGAGCC
TGGTAGGATAGAGAAACTCCTGCTGCTGAGACCCTGGCTCCATTCCTAAGCCTCCCAAGG
GAGCCTGCTTGATTACAAGGAGCCTGCAGCAAGCTGGCAATGTTGAGTCTTGAGCTAGAG
GGACCTTAGGGACCACCTAGTCCAATCTTTCCATTTGTGCAGAGGTGACCCAGGGCCAGA
GAGCATAGAGAGCGCTTGGGGAAGCAAAGCCCTGTGGAGCTCAGGCCTCCCAGCTCCGGT
TTCACTCAACCCAGCCCATGGTCATCAGCTTGGGATATGGTGCTTCTACCTGAGTTCTTA
TATAAAGACTGGGGAAGAAAAAAAAAAAGAGTTTAAAATCCAGAACTACTGCAAACCCTC
ACCCTACTGATGAGGAGACAGAGGCTTCATTGTGTCCATCACTCATTCATTCCCTCCCTC
GGCCAATCATTCATGTCCCTCCTTGGTGCTGAGGGGCAGGGAGAACCCAACCTGTGCCCA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGGCCTGGAAGTTAGGGCAGAGGCATGGAGCTTTTGTTGGGCTCAGGACAGAGGTGGGGG
TACCTTTGACATCTCTGCCAGCTTTTCATAGAAGCCAGCCCATTAGAAGCCATTTCACCT
TTAAGATCTGAGTAGGACAATGGTTACGATGCCGGTAATCAGCTGAACCATTGCCAGTGA
CCGTCTGGGCTGCTGGACTGGTGCCAGCCCTGCAGCTGGGCAGGCAATCTGCGTCAGCGA
TTTTATCAGCCTGGGCTGTGGCACCCAGGCACAGTGCAGAGAAAGCTGGCCGTCAGCAGT
CCTGGGGAGCGGGCCAGGCGCTCATCCACGAGTCAGCACATCCCCCCCCCGGGCAGGGGG
AGGGAATGGGGCCTCAGCAGTGGCCCGCTGTGTGAGAAGGGGCCTGCACAGCCCAGAGCC
TGGTAGGATAGAGAAACTCCTGCTGCTGAGACCCTGGCTCCATTCCTAAGCCTCCCAAGG
GAGCCTGCTTGATTACAAGGAGCCTGCAGCAAGCTGGCAATGTTGAGTCTTGAGCTAGAG
GGACCTTAGGGACCACCTAGTCCAATCTTTCCATTTGTGCAGAGGTGACCCAGGGCCAGA
GAGCATAGAGAGCGCTTGGGGAAGCAAAGCCCTGTGGAGCTCAGGCCTCCCAGCTCCGGT
TTCACTCAACCCAGCCCATGGTCATCAGCTTGGGATATGGTGCTTCTACCTGAGTTCTTA
TATAAAGACTGGGGAAGAAAAAAAAAAAGAGTTTAAAATCCAGAACTACTGCAAACCCTC
ACCCTACTGATGAGGAGACAGAGGCTTCATTGTGTCCATCACTCATTCATTCCCTCCCTC
GGCCAATCATTCATGTCCCTCCTTGGTGCTGAGGGGCAGGGAGAACCCAACCTGTGCCCA |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
107-358, gnl|bosTau2|chr11 (33478467-33478718) |
|
107-358, gnl|canFam2|chr17 (40436845-40437150) |
|
107-358, gnl|dasNov1|scaffold_77719 (402-227) |
|
107-358, gnl|echTel1|scaffold_298798 (5594-5924) |
|
107-358, gnl|hg17|chr2 (113713928-113714232) |
|
107-358, gnl|Hg17|chr2 (113714241-113714001) |
|
107-358, gnl|loxAfr1|scaffold_11269 (73072-72774) |
|
107-358, gnl|mm7|chr2 (24446490-24446784) |
|
107-358, gnl|Mm7|chr2 (24446797-24446536) |
|
107-358, gnl|monDom2|scaffold_63 (5777826-5777514) |
|
107-358, gnl|oryCun1|scaffold_208345 (51641-51335) |
|
107-358, gnl|panTro1|chr12 (116783640-116783943) |
|
107-358, gnl|rheMac2|chr13 (112609022-112609327) |
|
107-358, gnl|rn3|chr3 (2689731-2690023) |
| |
|
519-864, gnl|bosTau2|chr11 (33478950-33479285) |
|
519-864, gnl|Hg17|chr2 (113713755-113713423) |
|
519-864, gnl|Mm7|chr2 (24446317-24445860) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
107-358, gnl|bosTau2|chr11 (33478467-33478718) |
|
107-358, gnl|canFam2|chr17 (40436845-40437150) |
|
107-358, gnl|dasNov1|scaffold_77719 (402-227) |
|
107-358, gnl|echTel1|scaffold_298798 (5594-5924) |
|
107-358, gnl|hg17|chr2 (113713928-113714232) |
|
107-358, gnl|Hg17|chr2 (113714241-113714001) |
|
107-358, gnl|loxAfr1|scaffold_11269 (73072-72774) |
|
107-358, gnl|mm7|chr2 (24446490-24446784) |
|
107-358, gnl|Mm7|chr2 (24446797-24446536) |
|
107-358, gnl|monDom2|scaffold_63 (5777826-5777514) |
|
107-358, gnl|oryCun1|scaffold_208345 (51641-51335) |
|
107-358, gnl|panTro1|chr12 (116783640-116783943) |
|
107-358, gnl|rheMac2|chr13 (112609022-112609327) |
|
107-358, gnl|rn3|chr3 (2689731-2690023) |
| |
|
519-864, gnl|bosTau2|chr11 (33478950-33479285) |
|
519-864, gnl|Hg17|chr2 (113713755-113713423) |
|
519-864, gnl|Mm7|chr2 (24446317-24445860) |
|
nca (0.136874) |
|
cty (0.10408) |
|
nca (0.136874) |
|
cty (0.10408) |
