Non-Coding RNA Search

Ss1.1-rnca35b_b1.5

Sequence:


               
               AAGAAAGAAAGAAAAGAAAAAGGAAAAACCCCCAACCAAAAAACAACCAGAAACAGAGGT
AGAAAGACTTAGATTTTAACTTAAGGACTTTGAAGTATTTGTCCTCTTCAGGCAGGGGGA
GGCCTCCGCTTGAAGGATTTTAACTTGGCCTTTCGTGGCCCTGGAGGGAAGTCAGGCCTG
TCTTGGAGGGTGTGATCTAGAGTGGGGAATCCTGACCTTGCAGCTTTGACCTTGAAGAAA
CCCATTTAGCAGAAAGCATTGGGTCAGGGCTGGTGCTAGAGGTAAATCGGGGAATGTAAA
TCGGGGCCCATCTCAAGAAGCCTCAGGGCACCCTGCAAGGACCTCACTTCCTGGAGGAAG
TGTCTTTCCAGCTTGTCCTTCCAAGGTGCAGTCAGCCGTCTTGCTTTTTCATGGCCATTC
GATTCTGTAGAAACCCAGCATCTTTAGCTCCAAGCTTACATGTGGGCTGAGGAGAAAGGC
TCATTTTGGGGGCATCTCAGAGTTCCGCGTGGCAGGGCTCTTCAGGGTCATCTGAATCTT
CCTGTATCAGCCAACCAGTGAGCACCCAGGGTGGATTTTGAGGTCATTTTAACTATGGGA
TTATTTTTATAGAAGGGGAAAGTTTATGTGAAAGTCTATTTGTGTCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGAAAGAAAGAAAAGAAAAAGGAAAAACCCCCAACCAAAAAACAACCAGAAACAGAGGT
AGAAAGACTTAGATTTTAACTTAAGGACTTTGAAGTATTTGTCCTCTTCAGGCAGGGGGA
GGCCTCCGCTTGAAGGATTTTAACTTGGCCTTTCGTGGCCCTGGAGGGAAGTCAGGCCTG
TCTTGGAGGGTGTGATCTAGAGTGGGGAATCCTGACCTTGCAGCTTTGACCTTGAAGAAA
CCCATTTAGCAGAAAGCATTGGGTCAGGGCTGGTGCTAGAGGTAAATCGGGGAATGTAAA
TCGGGGCCCATCTCAAGAAGCCTCAGGGCACCCTGCAAGGACCTCACTTCCTGGAGGAAG
TGTCTTTCCAGCTTGTCCTTCCAAGGTGCAGTCAGCCGTCTTGCTTTTTCATGGCCATTC
GATTCTGTAGAAACCCAGCATCTTTAGCTCCAAGCTTACATGTGGGCTGAGGAGAAAGGC
TCATTTTGGGGGCATCTCAGAGTTCCGCGTGGCAGGGCTCTTCAGGGTCATCTGAATCTT
CCTGTATCAGCCAACCAGTGAGCACCCAGGGTGGATTTTGAGGTCATTTTAACTATGGGA
TTATTTTTATAGAAGGGGAAAGTTTATGTGAAAGTCTATTTGTGTCTT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               1-647, gnl|bosTau2|chr8 (57525343-57525965)
               

               
               1-647, gnl|Hg17|chr9 (114153383-114154003)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-647, gnl|bosTau2|chr8 (57525343-57525965)
               

               
               1-647, gnl|Hg17|chr9 (114153383-114154003)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               eep (0.367692)
               

               
               nca (0.136874)
               

               
               ese (0.126502)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.367692)
               

               
               nca (0.136874)
               

               
               ese (0.126502)

	1-647, gnl\|bosTau2\|chr8 (57525343-57525965)
	1-647, gnl\|Hg17\|chr9 (114153383-114154003)