Non-Coding RNA Search

Ss1.1-rnco1905b_j12.5

Sequence:


               
               GTCACGTTCCCGGGTCGAGGTCTCTCAGGACAGTTCTGAACTGTAAACAAATTGGTTAGG
GGGACACCAAAGTCAGCAGGAAGGCGGACACTCGAGTTCTCCAGGCGAGGTCACCAGCTG
CGGGGCAGCCTCTGAGCCTCAGCTTCCACCCCAGAGTGGCTGATAGGGTCCAGTGTGTCC
ATAGGGAGTTGAGCGCCCCCAGGCTGTGGTCCCCTCAGATGTCCCGGCTCCCGCAAATTG
TCCACAGTAAATAAAGCCGCCCCAAGTTCGGCCGTAAGCACAAAACCGAGCGCCCACCAC
CAGGCCACGCTGTTTATATTTGTTTGGCAGCTCATGGGCAAGTGTTGGCAAAATAGAATG
GCTCAGCTCGCTGCAAACTTCAAAGGGACTTGAGAAAATTTCTCTAGCACCACGTTAAAT
TGTGATTTACTCCATCCCTTACTGTCACACAGAGAAGATTCCAACAATCTTTTACTTGTC
AATAACCCCATAAAGAATATTCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCACGTTCCCGGGTCGAGGTCTCTCAGGACAGTTCTGAACTGTAAACAAATTGGTTAGG
GGGACACCAAAGTCAGCAGGAAGGCGGACACTCGAGTTCTCCAGGCGAGGTCACCAGCTG
CGGGGCAGCCTCTGAGCCTCAGCTTCCACCCCAGAGTGGCTGATAGGGTCCAGTGTGTCC
ATAGGGAGTTGAGCGCCCCCAGGCTGTGGTCCCCTCAGATGTCCCGGCTCCCGCAAATTG
TCCACAGTAAATAAAGCCGCCCCAAGTTCGGCCGTAAGCACAAAACCGAGCGCCCACCAC
CAGGCCACGCTGTTTATATTTGTTTGGCAGCTCATGGGCAAGTGTTGGCAAAATAGAATG
GCTCAGCTCGCTGCAAACTTCAAAGGGACTTGAGAAAATTTCTCTAGCACCACGTTAAAT
TGTGATTTACTCCATCCCTTACTGTCACACAGAGAAGATTCCAACAATCTTTTACTTGTC
AATAACCCCATAAAGAATATTCTT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               230-504, gnl|bosTau2|chr15 (25868609-25868338)
               

               
               230-504, gnl|Hg17|chr11 (9551074-9550810)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               230-504, gnl|bosTau2|chr15 (25868609-25868338)
               

               
               230-504, gnl|Hg17|chr11 (9551074-9550810)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               nco (0.161734)
               

               
               hyp (0.142837)
               

               
               che (0.136314)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nco (0.161734)
               

               
               hyp (0.142837)
               

               
               che (0.136314)

	230-504, gnl\|bosTau2\|chr15 (25868609-25868338)
	230-504, gnl\|Hg17\|chr11 (9551074-9550810)