Non-Coding RNA Search

Ss1.1-rnco1911b_p19.5

Sequence:


               
               CTTGGAGACCGCCGCGCGAGGAACGGACCGGAGCCGGCCGCACTCTTTGCTGCGGGTGTG
GCTGGTTCTCCCCCGTTCCGGGCGCGGCGGGCCGGCGGCTACCGAGTGCGTGCTTCACTC
CTGCACGCACAGCTTGTGCTCTATCGAGTAGGATCCGCCGACGGGGATTGAAAATGGGGG
AGTAGCTGCAGGAGGCGACCCCGCAACAGTGAGGTTTTTTTTTTTTGGTGGTGTGAAAAG
GCGGAATTAGAAATGAACCAAAAACCATTCACAGATTAACATTTTGAGACACTTCATGAT
GCCTGATTCACCTTTGAAGTAATGTGGAGAGAAGTTCTCAAATTTGCATATTACATCAAC
TGGAACCAGTGGCATTATCTTAATGTTCACTTAAGTCAGAACTTCTTCAGGAAAAACAAT
GGGAGTCTGGTTAAATAAAGATGCCTATATCAGAGACTTGAAAAGGGTCATTCTCTGTTT
TCTATTAGTGTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTGGAGACCGCCGCGCGAGGAACGGACCGGAGCCGGCCGCACTCTTTGCTGCGGGTGTG
GCTGGTTCTCCCCCGTTCCGGGCGCGGCGGGCCGGCGGCTACCGAGTGCGTGCTTCACTC
CTGCACGCACAGCTTGTGCTCTATCGAGTAGGATCCGCCGACGGGGATTGAAAATGGGGG
AGTAGCTGCAGGAGGCGACCCCGCAACAGTGAGGTTTTTTTTTTTTGGTGGTGTGAAAAG
GCGGAATTAGAAATGAACCAAAAACCATTCACAGATTAACATTTTGAGACACTTCATGAT
GCCTGATTCACCTTTGAAGTAATGTGGAGAGAAGTTCTCAAATTTGCATATTACATCAAC
TGGAACCAGTGGCATTATCTTAATGTTCACTTAAGTCAGAACTTCTTCAGGAAAAACAAT
GGGAGTCTGGTTAAATAAAGATGCCTATATCAGAGACTTGAAAAGGGTCATTCTCTGTTT
TCTATTAGTGTA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               220-492, gnl|bosTau2|chr26 (23793428-23793702)
               

               
               220-492, gnl|Hg17|chr2 (183406608-183408393)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               220-492, gnl|bosTau2|chr26 (23793428-23793702)
               

               
               220-492, gnl|Hg17|chr2 (183406608-183408393)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               nep (0.183925)
               

               
               nco (0.161734)
               

               
               che (0.136314)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)
               

               
               nco (0.161734)
               

               
               che (0.136314)

	220-492, gnl\|bosTau2\|chr26 (23793428-23793702)
	220-492, gnl\|Hg17\|chr2 (183406608-183408393)