Ss1.1-rnco1913b_h11.5
|
GCTCTGTCCTCCTCTTGGTCCTACACCTGCTGCAAGGGTCCCGAACTTCCTTGGTTCAGC
TGAACGCCAATGGCTACGAGGGCGTCCTCATTGCTATAGACCCTGCTGTGCCAGAAGATG
AAACACTCATCACAGAGATAAAGGACATGGTGACTGCTGCATCTACATACCTGTTTGAAG
CCACAGAAAAAAGATTCTATTTCAAAAATGTATCAATATTAATTCCAGAGAGCTGGAAGA
ACATCACACAATACAAGAGGCCAAAACAGGAAAGCTACAAACACGCTGATGTCATTGTTG
CACCACCGACCGTCCCAGGTAGAGACGAGCCGTATACCAAGCAGTTCACCGAGTGTGGAG
AAAAAGCAGAATACATCCATTTCACCCCCGACTTTGTACTCGGAAAAAAGCAAAATGAAT
TTGGACCATCAGGCAAAGCACTTGTGCACGAGTGGGCCCATCTCCGCTGGGGCGTGTTTG
ATGAGTACAATGATGATGAGCCTTTCTACAGCGCGAAGTCAAAGAAAATTGAAGCGACAA
GGTGCTCAACAGGTATTACTGGTATAAACAGAGTTAATAAGTGTCAAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCTCTGTCCTCCTCTTGGTCCTACACCTGCTGCAAGGGTCCCGAACTTCCTTGGTTCAGC
TGAACGCCAATGGCTACGAGGGCGTCCTCATTGCTATAGACCCTGCTGTGCCAGAAGATG
AAACACTCATCACAGAGATAAAGGACATGGTGACTGCTGCATCTACATACCTGTTTGAAG
CCACAGAAAAAAGATTCTATTTCAAAAATGTATCAATATTAATTCCAGAGAGCTGGAAGA
ACATCACACAATACAAGAGGCCAAAACAGGAAAGCTACAAACACGCTGATGTCATTGTTG
CACCACCGACCGTCCCAGGTAGAGACGAGCCGTATACCAAGCAGTTCACCGAGTGTGGAG
AAAAAGCAGAATACATCCATTTCACCCCCGACTTTGTACTCGGAAAAAAGCAAAATGAAT
TTGGACCATCAGGCAAAGCACTTGTGCACGAGTGGGCCCATCTCCGCTGGGGCGTGTTTG
ATGAGTACAATGATGATGAGCCTTTCTACAGCGCGAAGTCAAAGAAAATTGAAGCGACAA
GGTGCTCAACAGGTATTACTGGTATAAACAGAGTTAATAAGTGTCAAG
|
|
gi|61822013|ref|XP_596648.1| |
Protein identifier
|
gi|61822013|ref|XP_596648.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
138-283, gnl|bosTau2|chr3 (42388523-42388669) |
|
138-283, gnl|Hg17|chr1 (86737629-86737775) |
|
138-283, gnl|Mm7|chr3 (144863818-144863672) |
| |
|
430-542, gnl|bosTau2|chr3 (42393867-42393979) |
|
430-542, gnl|canFam2|chr6 (64635887-64635760) |
|
430-542, gnl|danRer3|chr19 (56804540-56804666) |
|
430-542, gnl|dasNov1|scaffold_4670 (21156-21029) |
|
430-542, gnl|echTel1|scaffold_324846 (85605-85735) |
|
430-542, gnl|galGal2|chr8 (16319890-16319768) |
|
430-542, gnl|hg17|chr1 (86741355-86741482) |
|
430-542, gnl|Hg17|chr1 (86741362-86741474) |
|
430-542, gnl|loxAfr1|scaffold_57189 (10620-10493) |
|
430-542, gnl|mm7|chr3 (144862485-144862353) |
|
430-542, gnl|Mm7|chr3 (144862475-144862363) |
|
430-542, gnl|monDom2|scaffold_123 (398127-398251) |
|
430-542, gnl|oryCun1|scaffold_177944 (35705-35578) |
|
430-542, gnl|panTro1|chr1 (85405701-85405828) |
|
430-542, gnl|rheMac2|chr1 (89285532-89285659) |
|
430-542, gnl|rn3|chr2 (243003299-243003167) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
138-283, gnl|bosTau2|chr3 (42388523-42388669) |
|
138-283, gnl|Hg17|chr1 (86737629-86737775) |
|
138-283, gnl|Mm7|chr3 (144863818-144863672) |
| |
|
430-542, gnl|bosTau2|chr3 (42393867-42393979) |
|
430-542, gnl|canFam2|chr6 (64635887-64635760) |
|
430-542, gnl|danRer3|chr19 (56804540-56804666) |
|
430-542, gnl|dasNov1|scaffold_4670 (21156-21029) |
|
430-542, gnl|echTel1|scaffold_324846 (85605-85735) |
|
430-542, gnl|galGal2|chr8 (16319890-16319768) |
|
430-542, gnl|hg17|chr1 (86741355-86741482) |
|
430-542, gnl|Hg17|chr1 (86741362-86741474) |
|
430-542, gnl|loxAfr1|scaffold_57189 (10620-10493) |
|
430-542, gnl|mm7|chr3 (144862485-144862353) |
|
430-542, gnl|Mm7|chr3 (144862475-144862363) |
|
430-542, gnl|monDom2|scaffold_123 (398127-398251) |
|
430-542, gnl|oryCun1|scaffold_177944 (35705-35578) |
|
430-542, gnl|panTro1|chr1 (85405701-85405828) |
|
430-542, gnl|rheMac2|chr1 (89285532-89285659) |
|
430-542, gnl|rn3|chr2 (243003299-243003167) |
|
nco (0.323468) |
|
ill (0.175593) |
|
nje (0.16592) |
|
nco (0.323468) |
|
ill (0.175593) |
|
nje (0.16592) |
