Non-Coding RNA Search

Ss1.1-rnco1913b_h8.5

Sequence:


               
               GTTGGCTGTACTCTATGGAGCTTTGTTTCTAGCTGTTCTCTGACAAAGGGCTTGATCTGT
GCAGCACATCTCGTCCTCTTTGTTCGCCTCTGGCTTCAACCACTGAATCACCAAGTACTC
TCCAGCTGGGAGTCAGACAAGGGCAGAGATGAAGAACCCAGAAGCCCAACAGGATGTTTC
GGTTTCCCAGGAAATTCGCATGATGTTTTACATGATGAAGCCCAATGAAACGTCATTCCA
AGCCCTAGAAGAGGTGCCTGATTATGTACAAAAGGCAACCCCATATTTCATTTCCTTGAT
GCTGCTTGAACTGGTTGTCAGCTGGATACGCAAAGGGAAGCCACCAGGTCGTCTGGATGA
TGCCTTAACATCAATGTCAGCTGGTATTCTGTCTCGACTTCCAAGTTTGTTTTCTAGGAG
CATTGAACTTACTAGTTACATTTATATCTGGGAGAACTACAGCATCATCAGTTTGCCTTG
GGATTCTCCATGGACTTGGTATTTAACTTTCTTGGGAGTTGACTTTGGCTACTACTGGTT
CCATCGTATGGCTCATGAGGTTAATATTCTGTGGGCTGCACACCAAACACACCACAGTTC
TGAAGGCTATAACTTATCCACAGCACTGAGACAATCTGTCTTCCAAATATATACTTCCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTGGCTGTACTCTATGGAGCTTTGTTTCTAGCTGTTCTCTGACAAAGGGCTTGATCTGT
GCAGCACATCTCGTCCTCTTTGTTCGCCTCTGGCTTCAACCACTGAATCACCAAGTACTC
TCCAGCTGGGAGTCAGACAAGGGCAGAGATGAAGAACCCAGAAGCCCAACAGGATGTTTC
GGTTTCCCAGGAAATTCGCATGATGTTTTACATGATGAAGCCCAATGAAACGTCATTCCA
AGCCCTAGAAGAGGTGCCTGATTATGTACAAAAGGCAACCCCATATTTCATTTCCTTGAT
GCTGCTTGAACTGGTTGTCAGCTGGATACGCAAAGGGAAGCCACCAGGTCGTCTGGATGA
TGCCTTAACATCAATGTCAGCTGGTATTCTGTCTCGACTTCCAAGTTTGTTTTCTAGGAG
CATTGAACTTACTAGTTACATTTATATCTGGGAGAACTACAGCATCATCAGTTTGCCTTG
GGATTCTCCATGGACTTGGTATTTAACTTTCTTGGGAGTTGACTTTGGCTACTACTGGTT
CCATCGTATGGCTCATGAGGTTAATATTCTGTGGGCTGCACACCAAACACACCACAGTTC
TGAAGGCTATAACTTATCCACAGCACTGAGACAATCTGTCTTCCAAATATATACTTCCTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|57096018|ref|XP_532482.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|57096018|ref|XP_532482.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               557-660, gnl|bosTau2|chr17 (23311633-23311736)
               

               
               557-660, gnl|Hg17|chr7 (15243974-15243871)
               

               
               557-660, gnl|Mm7|chr12 (35182733-35182836)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               557-660, gnl|bosTau2|chr17 (23311633-23311736)
               

               
               557-660, gnl|Hg17|chr7 (15243974-15243871)
               

               
               557-660, gnl|Mm7|chr12 (35182733-35182836)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nco (0.161734)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nco (0.161734)

	557-660, gnl\|bosTau2\|chr17 (23311633-23311736)
	557-660, gnl\|Hg17\|chr7 (15243974-15243871)
	557-660, gnl\|Mm7\|chr12 (35182733-35182836)