Non-Coding RNA Search

Ss1.1-rnco1914b_e5.5

Sequence:


               
               CGGAACTCAGGAGTCTATTTATGAAGAGTCTCCAGACCTTGGGCCAACGCGCGTGACTTG
GCACTTCGGGCTCCACGCTCAGAATCTCTCCGATGTTGGGACAAAGCGGACTCCATCGCT
CAGGGAGAGAGGCCTGGGTCTGTGCGACGAGGCCACGATCCTAAGGCCGTTTGAGCCGTA
GAAGGGGGAGGGGGAAGTCTTCGCTTTTTCTCAGTCTCTGCGCCTCGCGGCGGTCCCAGA
AGAAGGCTTTTCTGGAGAGATGCCTGCCTGGGGCCTTGAAGATCCCGCCACAAACACCAA
CTGCCCGGGGAGAGGTCTCCCTTGCTGCCTCTCCCTCTCTCCTTCCCCAACTTTGAGGCC
CTGATCGTCCAATATTTTAATTTAAAGACACCTAGTATCTGCTTTGTGCTTAAAAGGAAA
ATTCAACTCTTTTTTTTTTTTTCCTGGACGTTCTCCAAGGAAGTTTGTTCTCAGAAACCT
AAAGCAATGTCTGCACAGGCGAAGCTAAACAGAGAGCTGAAGCGAGGGGTCTCGACCATC
CGTGCACAATCCTGGGATCCCACTCCACTGAGGAAAAGCCTCCCTCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGAACTCAGGAGTCTATTTATGAAGAGTCTCCAGACCTTGGGCCAACGCGCGTGACTTG
GCACTTCGGGCTCCACGCTCAGAATCTCTCCGATGTTGGGACAAAGCGGACTCCATCGCT
CAGGGAGAGAGGCCTGGGTCTGTGCGACGAGGCCACGATCCTAAGGCCGTTTGAGCCGTA
GAAGGGGGAGGGGGAAGTCTTCGCTTTTTCTCAGTCTCTGCGCCTCGCGGCGGTCCCAGA
AGAAGGCTTTTCTGGAGAGATGCCTGCCTGGGGCCTTGAAGATCCCGCCACAAACACCAA
CTGCCCGGGGAGAGGTCTCCCTTGCTGCCTCTCCCTCTCTCCTTCCCCAACTTTGAGGCC
CTGATCGTCCAATATTTTAATTTAAAGACACCTAGTATCTGCTTTGTGCTTAAAAGGAAA
ATTCAACTCTTTTTTTTTTTTTCCTGGACGTTCTCCAAGGAAGTTTGTTCTCAGAAACCT
AAAGCAATGTCTGCACAGGCGAAGCTAAACAGAGAGCTGAAGCGAGGGGTCTCGACCATC
CGTGCACAATCCTGGGATCCCACTCCACTGAGGAAAAGCCTCCCTCTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-588, gnl|bosTau2|chr27 (16911848-16912427)
               

               
               1-588, gnl|Hg17|chr1 (47617384-47617969)
               

               
               1-588, gnl|Mm7|chr4 (114283714-114283154)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-588, gnl|bosTau2|chr27 (16911848-16912427)
               

               
               1-588, gnl|Hg17|chr1 (47617384-47617969)
               

               
               1-588, gnl|Mm7|chr4 (114283714-114283154)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ece (0.229305)
               

               
               nco (0.161734)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               nco (0.161734)

	1-588, gnl\|bosTau2\|chr27 (16911848-16912427)
	1-588, gnl\|Hg17\|chr1 (47617384-47617969)
	1-588, gnl\|Mm7\|chr4 (114283714-114283154)