Ss1.1-rnco1915b_g12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCACGCGTCCGGAAAGACTTGCTCATGTTCAGAGTCAAACTGATGACCAAGAAACAACTT GTTGTTTCTCTTCTATGTGGCCAACCCCACTCCCTTCATGGTTGGAGTACAAATGCGCTT CCGGGAGAAGGTTATGGAGAGCCCCATGGAAGAGGTCTCCCTGACTGCTTGACCTCTGAG CTCTGTCCTCTCGTCAGTTGGTGATGAAAAGCACATCCTACCACCCAAGCTTCAGGATGA CATCTTAGACTCTCTTGGCCATAAGATCAAGGAGTTACAGACTTCAGAACAAATCAACGA GCACGTTTCAGGACCTTTTGTGCAGTTCTTTGTCAAGACTGTGGGCCACTATGCTTCCTA CATCAAGCGGGAGGCAAATGGGCAAGGCCACTTCCAAGAACGGGCCTTCTACAAGGCCCT GCCCTCCAAGGCCAACCGTCGATTTGTGAAGAAGTTTGTGAAGACACAGCTCTTTTCCCT TTTCATCCAGGAAGCTGAGAAGAGCAAGAACCCACCTGCAGGCTATTTCCAGAAGAAAAT ACTTGAATATGAGGAACAGAAGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCACGCGTCCGGAAAGACTTGCTCATGTTCAGAGTCAAACTGATGACCAAGAAACAACTT GTTGTTTCTCTTCTATGTGGCCAACCCCACTCCCTTCATGGTTGGAGTACAAATGCGCTT CCGGGAGAAGGTTATGGAGAGCCCCATGGAAGAGGTCTCCCTGACTGCTTGACCTCTGAG CTCTGTCCTCTCGTCAGTTGGTGATGAAAAGCACATCCTACCACCCAAGCTTCAGGATGA CATCTTAGACTCTCTTGGCCATAAGATCAAGGAGTTACAGACTTCAGAACAAATCAACGA GCACGTTTCAGGACCTTTTGTGCAGTTCTTTGTCAAGACTGTGGGCCACTATGCTTCCTA CATCAAGCGGGAGGCAAATGGGCAAGGCCACTTCCAAGAACGGGCCTTCTACAAGGCCCT GCCCTCCAAGGCCAACCGTCGATTTGTGAAGAAGTTTGTGAAGACACAGCTCTTTTCCCT TTTCATCCAGGAAGCTGAGAAGAGCAAGAACCCACCTGCAGGCTATTTCCAGAAGAAAAT ACTTGAATATGAGGAACAGAAGAA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 321-440, + strand, RNAz p=0.730132 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 321-440, + strand, RNAz p=0.730132 |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 157-281, gnl|bosTau2|chr3 (28533475-28533604) | |
| 157-281, gnl|Hg17|chr1 (111443486-111443366) | |
| 157-281, gnl|Mm7|chr3 (106317462-106317593) | |
| 282-527, gnl|bosTau2|chr3 (28533942-28534186) | |
| 282-527, gnl|Hg17|chr1 (111443034-111442792) | |
| 282-527, gnl|Mm7|chr3 (106318043-106318287) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 157-281, gnl|bosTau2|chr3 (28533475-28533604) | |
| 157-281, gnl|Hg17|chr1 (111443486-111443366) | |
| 157-281, gnl|Mm7|chr3 (106317462-106317593) | |
| 282-527, gnl|bosTau2|chr3 (28533942-28534186) | |
| 282-527, gnl|Hg17|chr1 (111443034-111442792) | |
| 282-527, gnl|Mm7|chr3 (106318043-106318287) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nco (0.161734) |