Non-Coding RNA Search

Ss1.1-rnco1918b_p3.5

Sequence:


               
               GCCACACAGCCAGGACACGGTCAAGGAGGAGCAGGAGGTGGCCGAGATGGGGCCGCCCGA
AGGTTCAGCTCCCATGACCAGCACGGTGATCACCATCCCCAGGGAGACCCCCCACCGGGA
CCACGTCGTCTGGTCGCTGTTCAGCACCCTCTTCCTGAACTGGTGCTGCCTGGGCTTCGT
GGCTTTCGCCTACTCCGTGAAGGCGAGGGACCGGAAGATGGTGGGAGACATCACTGGGGC
CCAGAGCTATGCCTCCACCGCCAAGTGCCTGAACATCTGGGCCCTGGTCCTGGGCCTCCT
TCTGACCATTACACTTATTGCTGTTTTTGCCACTGTTTCAGCGGTGAAATTCAGACTGTA
TTTTCGGATTTAAGGCAAGAGGGAGGCTACCAGCAGCCATCCACGGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCACACAGCCAGGACACGGTCAAGGAGGAGCAGGAGGTGGCCGAGATGGGGCCGCCCGA
AGGTTCAGCTCCCATGACCAGCACGGTGATCACCATCCCCAGGGAGACCCCCCACCGGGA
CCACGTCGTCTGGTCGCTGTTCAGCACCCTCTTCCTGAACTGGTGCTGCCTGGGCTTCGT
GGCTTTCGCCTACTCCGTGAAGGCGAGGGACCGGAAGATGGTGGGAGACATCACTGGGGC
CCAGAGCTATGCCTCCACCGCCAAGTGCCTGAACATCTGGGCCCTGGTCCTGGGCCTCCT
TCTGACCATTACACTTATTGCTGTTTTTGCCACTGTTTCAGCGGTGAAATTCAGACTGTA
TTTTCGGATTTAAGGCAAGAGGGAGGCTACCAGCAGCCATCCACGGCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|32880061|gb|AAP88861.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|32880061|gb|AAP88861.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-393, gnl|bosTau2|chr14 (38478029-38478422)
               

               
               2-393, gnl|Hg17|chr2 (60821983-60821590)
               

               
               2-393, gnl|Mm7|chr11 (3585404-3585034)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-393, gnl|bosTau2|chr14 (38478029-38478422)
               

               
               2-393, gnl|Hg17|chr2 (60821983-60821590)
               

               
               2-393, gnl|Mm7|chr11 (3585404-3585034)

Expressed library(ies): 9 entry(ies)

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Expressed library(ies): 9 entry(ies)

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               cly (0.241284)
               

               
               clu (0.239292)
               

               
               mas (0.210305)
               

               
               nlu (0.191681)
               

               
               cut (0.169924)
               

               
               nco (0.161734)
               

               
               ute (0.132784)
               

               
               cov (0.132153)
               

               
               jca (0.11396)

Expressed library(ies): 9 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cly (0.241284)
               

               
               clu (0.239292)
               

               
               mas (0.210305)
               

               
               nlu (0.191681)
               

               
               cut (0.169924)
               

               
               nco (0.161734)
               

               
               ute (0.132784)
               

               
               cov (0.132153)
               

               
               jca (0.11396)

	2-393, gnl\|bosTau2\|chr14 (38478029-38478422)
	2-393, gnl\|Hg17\|chr2 (60821983-60821590)
	2-393, gnl\|Mm7\|chr11 (3585404-3585034)

	cly (0.241284)
	clu (0.239292)
	mas (0.210305)
	nlu (0.191681)
	cut (0.169924)
	nco (0.161734)
	ute (0.132784)
	cov (0.132153)
	jca (0.11396)