Ss1.1-rnco1921b_e3.5
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CACTCCTGAGACATTCAGGAGACTGTGCTGCAGGCTCTCAGGGAGCCCCTGACGGCAGCA
GCCACCTGGTTGGAACAAGGCGTGGGCATCTGAGGTGCCTGTTCCGAAGGCTGGTACTCA
GCAGGATGGCTAAGTCCTGGAGTGCGCGTTTCAGAAGCAGTGTTGATAATCTTCCTAGTC
ATGCCTTGTGCAGTTCTGAGATGAAGGGTAGATGGCAGGCCTGGGCTAGGATCCTGAGGT
CCTGAGGGCCCCCTGCCTTGTTGGGGCCTGTCTGTGCTCAGGGGAAGCCCATCCCTGTCC
GGGAGAGCCTCGGCCCTTCAGTGGGTAGCACGCTCAACCTTACTTGAAGCTCCCAGGTGC
CAAACCGTTTAGTGCCTTGGCTGTCTATCCCACTGCCTTGGAAATGGATTCTTCTCATCT
CTGAGCCTTGACTTTCTTAGCCGCTTCCTCATCTCCTTGTGGTGTTGGGACCAAGCCTCC
AGCATCTCTGAGCAGCCTAGTCCTGGCTGGGAAACAGCTCCAGGGCTGCCCTGCCTTTCA
GTAGAACCATCACCAATTCTTGGTGTCCTGGCTGGGAGCTCGCTGGGCTGTGCCGCCCAC
TCCTCTGGTTCTGTGACACACTATGTCTGGGGCCAGGAAGGGTTAGGAAGTTCTGCCTCT
CAAAGGCGATCACCCCAACATTTAACCAACTGAGAATCTGAACTTGAGCTTTCTATGCGG
CAAAGCCCAGACTTTGGTATTTTCAGAGCCCCTGGATCTCTGATTCCCCTGGATGATCGG
GTAGAATCATTAGGCCAGAAATCATGCCATGAGTTATCAGGGTGGTGCTCTTTGCTGTCC
AGGGAGGCGATGTGGATGAACAGAGTGGGGTAGTGTTGGTTGTGTGTGCATGGGAGTCCC
TAGGCTTCAGGGCCACCCAGGGGTACTTGCTTCTCT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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CACTCCTGAGACATTCAGGAGACTGTGCTGCAGGCTCTCAGGGAGCCCCTGACGGCAGCA
GCCACCTGGTTGGAACAAGGCGTGGGCATCTGAGGTGCCTGTTCCGAAGGCTGGTACTCA
GCAGGATGGCTAAGTCCTGGAGTGCGCGTTTCAGAAGCAGTGTTGATAATCTTCCTAGTC
ATGCCTTGTGCAGTTCTGAGATGAAGGGTAGATGGCAGGCCTGGGCTAGGATCCTGAGGT
CCTGAGGGCCCCCTGCCTTGTTGGGGCCTGTCTGTGCTCAGGGGAAGCCCATCCCTGTCC
GGGAGAGCCTCGGCCCTTCAGTGGGTAGCACGCTCAACCTTACTTGAAGCTCCCAGGTGC
CAAACCGTTTAGTGCCTTGGCTGTCTATCCCACTGCCTTGGAAATGGATTCTTCTCATCT
CTGAGCCTTGACTTTCTTAGCCGCTTCCTCATCTCCTTGTGGTGTTGGGACCAAGCCTCC
AGCATCTCTGAGCAGCCTAGTCCTGGCTGGGAAACAGCTCCAGGGCTGCCCTGCCTTTCA
GTAGAACCATCACCAATTCTTGGTGTCCTGGCTGGGAGCTCGCTGGGCTGTGCCGCCCAC
TCCTCTGGTTCTGTGACACACTATGTCTGGGGCCAGGAAGGGTTAGGAAGTTCTGCCTCT
CAAAGGCGATCACCCCAACATTTAACCAACTGAGAATCTGAACTTGAGCTTTCTATGCGG
CAAAGCCCAGACTTTGGTATTTTCAGAGCCCCTGGATCTCTGATTCCCCTGGATGATCGG
GTAGAATCATTAGGCCAGAAATCATGCCATGAGTTATCAGGGTGGTGCTCTTTGCTGTCC
AGGGAGGCGATGTGGATGAACAGAGTGGGGTAGTGTTGGTTGTGTGTGCATGGGAGTCCC
TAGGCTTCAGGGCCACCCAGGGGTACTTGCTTCTCT
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
19-543, gnl|bosTau2|chr3 (3676465-3675940) |
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19-543, gnl|Hg17|chr1 (162610481-162610988) |
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19-543, gnl|Mm7|chr1 (167199887-167199386) |
| |
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558-756, gnl|bosTau2|chr3 (3675714-3675520) |
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558-756, gnl|canFam2|chr38 (20476952-20476786) |
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558-756, gnl|dasNov1|scaffold_17496 (53577-53397) |
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558-756, gnl|echTel1|scaffold_106686 (786-950) |
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558-756, gnl|hg17|chr1 (162611003-162611156) |
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558-756, gnl|Hg17|chr1 (162611002-162611186) |
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558-756, gnl|loxAfr1|scaffold_61310 (10122-10291) |
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558-756, gnl|mm7|chr1 (167199370-167199252) |
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558-756, gnl|oryCun1|scaffold_207029 (110874-110755) |
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558-756, gnl|panTro1|chr1 (144859687-144859840) |
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558-756, gnl|rheMac2|chr1 (195758283-195758433) |
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558-756, gnl|rn3|chr13 (82905323-82905207) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
19-543, gnl|bosTau2|chr3 (3676465-3675940) |
|
19-543, gnl|Hg17|chr1 (162610481-162610988) |
|
19-543, gnl|Mm7|chr1 (167199887-167199386) |
| |
|
558-756, gnl|bosTau2|chr3 (3675714-3675520) |
|
558-756, gnl|canFam2|chr38 (20476952-20476786) |
|
558-756, gnl|dasNov1|scaffold_17496 (53577-53397) |
|
558-756, gnl|echTel1|scaffold_106686 (786-950) |
|
558-756, gnl|hg17|chr1 (162611003-162611156) |
|
558-756, gnl|Hg17|chr1 (162611002-162611186) |
|
558-756, gnl|loxAfr1|scaffold_61310 (10122-10291) |
|
558-756, gnl|mm7|chr1 (167199370-167199252) |
|
558-756, gnl|oryCun1|scaffold_207029 (110874-110755) |
|
558-756, gnl|panTro1|chr1 (144859687-144859840) |
|
558-756, gnl|rheMac2|chr1 (195758283-195758433) |
|
558-756, gnl|rn3|chr13 (82905323-82905207) |
