Ss1.1-rnco1922b_a13.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCGGGAGATGTAATGATGCTTCAGGGCATGGGCCACGTGCCAGGGAAACCGAGGTTTTG CCTGGCAAGCGTTCACCCAGTCTTTGTTGTGGAGCATGCTGGTTAACAGCCATAGCCGTG CAGGGGGCAGCTGCTCGCTCAGCCACTCACCAGCTGGCATGACCTTGAGTGAGTCGTTTT ATTTCCCCAGTTTTCTCCTCTGTCAAATGAGATTAACAGTAGTATCAGTTCCTCCGGTGG TTGGCAATGGCTCATCCCACTGATGCGCATAAAGCTGCTGGCACTGGGTCAAGAGCTCAG TCAGAACGCTAGCAAATCGATGGATGGGGACATTTATAATAGACAAGAGACTGAATCCGG GTAGGCGTCCCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCGGGAGATGTAATGATGCTTCAGGGCATGGGCCACGTGCCAGGGAAACCGAGGTTTTG CCTGGCAAGCGTTCACCCAGTCTTTGTTGTGGAGCATGCTGGTTAACAGCCATAGCCGTG CAGGGGGCAGCTGCTCGCTCAGCCACTCACCAGCTGGCATGACCTTGAGTGAGTCGTTTT ATTTCCCCAGTTTTCTCCTCTGTCAAATGAGATTAACAGTAGTATCAGTTCCTCCGGTGG TTGGCAATGGCTCATCCCACTGATGCGCATAAAGCTGCTGGCACTGGGTCAAGAGCTCAG TCAGAACGCTAGCAAATCGATGGATGGGGACATTTATAATAGACAAGAGACTGAATCCGG GTAGGCGTCCCT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 77-190, - strand, RNAz p=0.684871 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 77-190, - strand, RNAz p=0.684871 |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 1-372, gnl|bosTau2|chr13 (55410340-55409966) | |
| 1-372, gnl|Hg17|chr20 (43481743-43482129) | |
| 1-372, gnl|Mm7|chr2 (164241258-164241676) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-372, gnl|bosTau2|chr13 (55410340-55409966) | |
| 1-372, gnl|Hg17|chr20 (43481743-43482129) | |
| 1-372, gnl|Mm7|chr2 (164241258-164241676) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nco (0.161734) | |
| med (0.116252) |