Non-Coding RNA Search

Ss1.1-rnco1922b_b11.5

Sequence:


               
               CCCTGCGCGCAGCAGCCCCAGCCTGGCGTCGGAGAAGGAGCGCAGAGTCGGCGCCCGACT
GTGTCCCACGCGGCAGACCCTCGTCCCCACCGCTAGGACGTCGCCGAGGGGCACAAAGCA
AACCTCGCAGACACGCGCCTCCCGCGGACGTCCCGTCCTCCACAGCGGCCTTACTGCATC
GTCCCGTTCCCCCCCCCCCCCCGCTTTCACTTTTCTGACCGATGGGTTATATTCTAGAAA
ATGGCAATTTTGGGCCAGCACAAAAAAAGTGACACCAAAAACTAAGTAGAAGTGGAAAGC
AAATGAGAACGTCTTGTTCCTCAGTATCACGGGTTTTTGTTCCTGTTTTATAAGTAATTT
TCCCCACTTGATTTTTCTTTTATAAAAACTCATAGAGCAGTGTTTATGATACAGCCATTT
AATATATGTACAAATTGTAAAGAATATGTATAAATGTTTTACACAAATGTAAGAGCATGT
AGAAGCCAACATATATAAATAAATTGTTAAAAAAAAAACTGTACAGTAAATTCTCAAGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCTGCGCGCAGCAGCCCCAGCCTGGCGTCGGAGAAGGAGCGCAGAGTCGGCGCCCGACT
GTGTCCCACGCGGCAGACCCTCGTCCCCACCGCTAGGACGTCGCCGAGGGGCACAAAGCA
AACCTCGCAGACACGCGCCTCCCGCGGACGTCCCGTCCTCCACAGCGGCCTTACTGCATC
GTCCCGTTCCCCCCCCCCCCCCGCTTTCACTTTTCTGACCGATGGGTTATATTCTAGAAA
ATGGCAATTTTGGGCCAGCACAAAAAAAGTGACACCAAAAACTAAGTAGAAGTGGAAAGC
AAATGAGAACGTCTTGTTCCTCAGTATCACGGGTTTTTGTTCCTGTTTTATAAGTAATTT
TCCCCACTTGATTTTTCTTTTATAAAAACTCATAGAGCAGTGTTTATGATACAGCCATTT
AATATATGTACAAATTGTAAAGAATATGTATAAATGTTTTACACAAATGTAAGAGCATGT
AGAAGCCAACATATATAAATAAATTGTTAAAAAAAAAACTGTACAGTAAATTCTCAAGCA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               191-540, gnl|bosTau2|chr9 (57961541-57961901)
               

               
               191-540, gnl|Hg17|chr6 (158335621-158335964)
               

               
               191-540, gnl|Mm7|chr17 (5878099-5878445)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               191-540, gnl|bosTau2|chr9 (57961541-57961901)
               

               
               191-540, gnl|Hg17|chr6 (158335621-158335964)
               

               
               191-540, gnl|Mm7|chr17 (5878099-5878445)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               mcp (0.341297)
               

               
               fcc (0.197785)
               

               
               fbs (0.175346)
               

               
               nco (0.161734)
               

               
               jca (0.11396)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mcp (0.341297)
               

               
               fcc (0.197785)
               

               
               fbs (0.175346)
               

               
               nco (0.161734)
               

               
               jca (0.11396)

	191-540, gnl\|bosTau2\|chr9 (57961541-57961901)
	191-540, gnl\|Hg17\|chr6 (158335621-158335964)
	191-540, gnl\|Mm7\|chr17 (5878099-5878445)

	mcp (0.341297)
	fcc (0.197785)
	fbs (0.175346)
	nco (0.161734)
	jca (0.11396)