Ss1.1-rnco1922b_f18.5
|
GCCGGGCTCCGACGCCGCGGCCCTGCTCGGGGGACAGGGGTTCTGGAGAGACTGTCCAGT
CCGCTTCGGGCCCCATCTTCCAGTAATTCGCCAAAATGACAAACACGAAGGGAAAGAGGA
GGGGCACCCGCTATATGTTCTCTCGGCCTTTTAGAAAACATGGAGTCGTTCCTTTGGCCA
CATACATGCGAATCTACAAGAAAGGTGATATTGTAGACATCAAGGGAATGGGCACTGTTC
AAAAAGGAATGCCCCACAAGTGTTACCATGGCAAAACTGGAAGAGTCTACAATGTAACCC
AGCATGCTGTTGGCATTGTTGTAAACAAACAGGTTAAGGGCAAGATTCTTGCCAAGAGAA
TTAATGTGCGTATCGAGCATATCAAACACTCTAAGAGCCGAGACAGCTTCCTGAAACGTG
TGAAGGAAAACGATCAGAAAAAGAAGGAAGCCAAAGAGAAAGGGACTTGGGTTCAGCTGA
AGCGCCAGCCTGCTCCACCCAGAGAAGCTCACTTCGTGAGAACCAACGGAAAGGAGCCTG
AACTGTTGGAACCCATTCCTTATGAATTCATGGCATGATGAGTGTAAAGAAAATAAAAGA
CTTAGATTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAGTGTTTTCTCCTCCTCCAAAGAA
ATATTTAAAGCAGGTTTTGTGTTC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCCGGGCTCCGACGCCGCGGCCCTGCTCGGGGGACAGGGGTTCTGGAGAGACTGTCCAGT
CCGCTTCGGGCCCCATCTTCCAGTAATTCGCCAAAATGACAAACACGAAGGGAAAGAGGA
GGGGCACCCGCTATATGTTCTCTCGGCCTTTTAGAAAACATGGAGTCGTTCCTTTGGCCA
CATACATGCGAATCTACAAGAAAGGTGATATTGTAGACATCAAGGGAATGGGCACTGTTC
AAAAAGGAATGCCCCACAAGTGTTACCATGGCAAAACTGGAAGAGTCTACAATGTAACCC
AGCATGCTGTTGGCATTGTTGTAAACAAACAGGTTAAGGGCAAGATTCTTGCCAAGAGAA
TTAATGTGCGTATCGAGCATATCAAACACTCTAAGAGCCGAGACAGCTTCCTGAAACGTG
TGAAGGAAAACGATCAGAAAAAGAAGGAAGCCAAAGAGAAAGGGACTTGGGTTCAGCTGA
AGCGCCAGCCTGCTCCACCCAGAGAAGCTCACTTCGTGAGAACCAACGGAAAGGAGCCTG
AACTGTTGGAACCCATTCCTTATGAATTCATGGCATGATGAGTGTAAAGAAAATAAAAGA
CTTAGATTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAGTGTTTTCTCCTCCTCCAAAGAA
ATATTTAAAGCAGGTTTTGTGTTC
|
|
gi|57110921|ref|XP_536024.1| |
Protein identifier
|
gi|57110921|ref|XP_536024.1| |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
thg (3.55015) |
|
cag (3.47747) |
|
ova (3.22831) |
|
nco (3.07294) |
|
med (3.02255) |
|
ssp (2.98143) |
|
eje (2.76735) |
|
sme (2.74893) |
|
bla (2.61129) |
|
pgl (2.60664) |
|
ton (2.457) |
|
fat (2.35884) |
|
aor (2.14802) |
|
nbm (2.08582) |
|
rec (2.07684) |
|
pro (2.04813) |
|
vin (1.99534) |
|
col (1.95008) |
|
bfe (1.94815) |
|
spc (1.92722) |
|
nca (1.91623) |
|
hea (1.84049) |
|
cly (1.80963) |
|
isp (1.80451) |
|
fcc (1.78006) |
|
fty (1.7584) |
|
nlu (1.72513) |
|
cov (1.71799) |
|
jca (1.7094) |
|
lnt (1.7077) |
|
cga (1.67457) |
|
nep (1.65532) |
|
fli (1.62305) |
|
mgp (1.61476) |
|
sug (1.52749) |
|
ese (1.51803) |
|
nje (1.49328) |
|
mas (1.47213) |
|
pan (1.41576) |
|
nmm (1.32802) |
|
csp (1.28949) |
|
csk (1.26671) |
|
ill (1.22915) |
|
sin (1.22463) |
|
eru (1.20048) |
|
lyg (1.19792) |
|
ute (1.19506) |
|
mcp (1.19454) |
|
hyp (1.14269) |
|
hlv (1.11405) |
|
gul (1.06553) |
|
ebs (1.06471) |
|
pty (0.999001) |
|
ecc (0.920281) |
|
sag (0.913576) |
|
eep (0.857948) |
|
cut (0.849618) |
|
cje (0.826173) |
|
elu (0.770713) |
|
cbr (0.767853) |
|
eli (0.759071) |
|
cmu (0.745573) |
|
ski (0.733676) |
|
cbe (0.717703) |
|
fbs (0.701385) |
|
ece (0.687916) |
|
eye (0.682012) |
|
nms (0.641574) |
|
mga (0.64082) |
|
fco (0.628832) |
|
tes (0.623441) |
|
cli (0.611247) |
|
jej (0.593531) |
|
cte (0.58548) |
|
che (0.545256) |
|
fce (0.543183) |
|
mgm (0.541028) |
|
sto (0.539471) |
|
spl (0.429553) |
|
amn (0.417711) |
|
kid (0.389206) |
|
duo (0.345602) |
|
fhi (0.339155) |
|
cki (0.330469) |
|
ste (0.270416) |
|
pla (0.267344) |
|
liv (0.146284) |
|
lin (0.145603) |
|
cst (0.140036) |
|
ret (0.128733) |
|
tra (0.123092) |
|
clu (0.119646) |
|
thg (3.55015) |
|
cag (3.47747) |
|
ova (3.22831) |
|
nco (3.07294) |
|
med (3.02255) |
|
ssp (2.98143) |
|
eje (2.76735) |
|
sme (2.74893) |
|
bla (2.61129) |
|
pgl (2.60664) |
|
ton (2.457) |
|
fat (2.35884) |
|
aor (2.14802) |
|
nbm (2.08582) |
|
rec (2.07684) |
|
pro (2.04813) |
|
vin (1.99534) |
|
col (1.95008) |
|
bfe (1.94815) |
|
spc (1.92722) |
|
nca (1.91623) |
|
hea (1.84049) |
|
cly (1.80963) |
|
isp (1.80451) |
|
fcc (1.78006) |
|
fty (1.7584) |
|
nlu (1.72513) |
|
cov (1.71799) |
|
jca (1.7094) |
|
lnt (1.7077) |
|
cga (1.67457) |
|
nep (1.65532) |
|
fli (1.62305) |
|
mgp (1.61476) |
|
sug (1.52749) |
|
ese (1.51803) |
|
nje (1.49328) |
|
mas (1.47213) |
|
pan (1.41576) |
|
nmm (1.32802) |
|
csp (1.28949) |
|
csk (1.26671) |
|
ill (1.22915) |
|
sin (1.22463) |
|
eru (1.20048) |
|
lyg (1.19792) |
|
ute (1.19506) |
|
mcp (1.19454) |
|
hyp (1.14269) |
|
hlv (1.11405) |
|
gul (1.06553) |
|
ebs (1.06471) |
|
pty (0.999001) |
|
ecc (0.920281) |
|
sag (0.913576) |
|
eep (0.857948) |
|
cut (0.849618) |
|
cje (0.826173) |
|
elu (0.770713) |
|
cbr (0.767853) |
|
eli (0.759071) |
|
cmu (0.745573) |
|
ski (0.733676) |
|
cbe (0.717703) |
|
fbs (0.701385) |
|
ece (0.687916) |
|
eye (0.682012) |
|
nms (0.641574) |
|
mga (0.64082) |
|
fco (0.628832) |
|
tes (0.623441) |
|
cli (0.611247) |
|
jej (0.593531) |
|
cte (0.58548) |
|
che (0.545256) |
|
fce (0.543183) |
|
mgm (0.541028) |
|
sto (0.539471) |
|
spl (0.429553) |
|
amn (0.417711) |
|
kid (0.389206) |
|
duo (0.345602) |
|
fhi (0.339155) |
|
cki (0.330469) |
|
ste (0.270416) |
|
pla (0.267344) |
|
liv (0.146284) |
|
lin (0.145603) |
|
cst (0.140036) |
|
ret (0.128733) |
|
tra (0.123092) |
|
clu (0.119646) |
