Ss1.1-rnco1924b_h11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGACAGCAGAGCTCACACATCAGACAGCAGTGCTTGTGGGCCTTTCTGGAGCAGAAACTC TTCTCTCACAGGGAGGGACACAGCAGGCACCAGGCACCATGGAGCCCCCCTCAGCCCCTG CCCACGGAGGGCGCATCTCCTGGCACAGGCTTCTGTTGGCAGTCTCACTCCTAAGCTTCT GGAACCTGCCCGCCACTGCCCAGATCACTATTGAATCAGTGCCCTTCAAAACTGCAGAAG GAAGGGATGTTCTTCTACTTGCCCACAATGCGACAGAGGATACTCTAGGCTACAGCTGGT ACAGAGGAGAAAGAGTAGAGAACAACCAACTAATTATATTATATAGAGTAGACATTCAAG CAAATACCACAGGGCCTGCATACAGTGGTCGAGAGATAATCTACCCCAATGGATCCCTGC TGTTCCAGAATGCCACCCAGAATGACACAGGATACTACACTCTGATGGTTACAAAGAATG ATTTACAGAGAGAAATTGTAACTGGACTACTCCGTGTATACCCACCAGTGACAAAGCCCA TCATTGAAGCCAACAGCACCACCGTCACAGAACAAAAGGACACCGTGGTCCTGACCTGCA TCATAAATGACACTGAGGTCTCCATACGCTGGCTCTTCAATGGCCAGAGTCTACTGCTCA CAGAAAGGATAAAGCTGTCCCAGGAAAACAGCACCCTCACCATAGAGCCCGTCAGGAGGG AGGATGCTGGGAATTATCAGTGCGAGGCCTCCAACCCAGGAAATTCCAGCCTAAGTGACC CTCTCAGGCTGGATGTGAAATTTGATTCAATACCAGGAAGTACTTCTGGCGTCTCAGATG GTGGTATTGCTGGCATTGTGATTGGAGTCCTGGCTGGGGTAGCTCTCATAGCAGGCCTGG TGTAATTTCTGTGTATCAGATAGACTGGAGGGTCACAGCCATGTCAACTACTCACCTAGC AAGATCGATGAAGTTACATATTCTTCCCTGAACTTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGACAGCAGAGCTCACACATCAGACAGCAGTGCTTGTGGGCCTTTCTGGAGCAGAAACTC TTCTCTCACAGGGAGGGACACAGCAGGCACCAGGCACCATGGAGCCCCCCTCAGCCCCTG CCCACGGAGGGCGCATCTCCTGGCACAGGCTTCTGTTGGCAGTCTCACTCCTAAGCTTCT GGAACCTGCCCGCCACTGCCCAGATCACTATTGAATCAGTGCCCTTCAAAACTGCAGAAG GAAGGGATGTTCTTCTACTTGCCCACAATGCGACAGAGGATACTCTAGGCTACAGCTGGT ACAGAGGAGAAAGAGTAGAGAACAACCAACTAATTATATTATATAGAGTAGACATTCAAG CAAATACCACAGGGCCTGCATACAGTGGTCGAGAGATAATCTACCCCAATGGATCCCTGC TGTTCCAGAATGCCACCCAGAATGACACAGGATACTACACTCTGATGGTTACAAAGAATG ATTTACAGAGAGAAATTGTAACTGGACTACTCCGTGTATACCCACCAGTGACAAAGCCCA TCATTGAAGCCAACAGCACCACCGTCACAGAACAAAAGGACACCGTGGTCCTGACCTGCA TCATAAATGACACTGAGGTCTCCATACGCTGGCTCTTCAATGGCCAGAGTCTACTGCTCA CAGAAAGGATAAAGCTGTCCCAGGAAAACAGCACCCTCACCATAGAGCCCGTCAGGAGGG AGGATGCTGGGAATTATCAGTGCGAGGCCTCCAACCCAGGAAATTCCAGCCTAAGTGACC CTCTCAGGCTGGATGTGAAATTTGATTCAATACCAGGAAGTACTTCTGGCGTCTCAGATG GTGGTATTGCTGGCATTGTGATTGGAGTCCTGGCTGGGGTAGCTCTCATAGCAGGCCTGG TGTAATTTCTGTGTATCAGATAGACTGGAGGGTCACAGCCATGTCAACTACTCACCTAGC AAGATCGATGAAGTTACATATTCTTCCCTGAACTTC |
| Aligned organism(s): 64 entry(ies) | More info |
| Aligned organism(s): 64 entry(ies) | Help | Less info |
| 161-522, gnl|bosTau2|chr18 (46686747-46687108) | |
| 161-522, gnl|canFam2|chr1 (114683850-114683378) | |
| 161-522, gnl|canFam2|chr1 (114795436-114796111) | |
| 161-522, gnl|canFam2|chr1 (114663233-114662487) | |
| 161-522, gnl|canFam2|chr1 (114604671-114604294) | |
| 161-522, gnl|canFam2|chr1 (114706030-114705563) | |
| 161-522, gnl|canFam2|chr1 (114662401-114663073) | |
| 161-522, gnl|dasNov1|scaffold_101401 (4247-4714) | |
| 161-522, gnl|dasNov1|scaffold_19961 (45009-45463) | |
| 161-522, gnl|dasNov1|scaffold_19961 (45477-44822) | |
| 161-522, gnl|dasNov1|scaffold_19961 (44638-45475) | |
| 161-522, gnl|dasNov1|scaffold_19961 (45097-45476) | |
| 161-522, gnl|dasNov1|scaffold_41026 (4117-4827) | |
| 161-522, gnl|echTel1|scaffold_206246 (2830-3534) | |
| 161-522, gnl|echTel1|scaffold_283438 (33867-34311) | |
| 161-522, gnl|echTel1|scaffold_285146 (44125-43652) | |
| 161-522, gnl|echTel1|scaffold_285146 (43635-44271) | |
| 161-522, gnl|echTel1|scaffold_285146 (44459-43640) | |
| 161-522, gnl|echTel1|scaffold_285146 (44018-43639) | |
| 161-522, gnl|hg17|chr19 (48220570-48221053) | |
| 161-522, gnl|hg17|chr19 (46952329-46952998) | |
| 161-522, gnl|hg17|chr19 (47959421-47960291) | |
| 161-522, gnl|hg17|chr19 (48073903-48074287) | |
| 161-522, gnl|hg17|chr19 (47756417-47756885) | |
| 161-522, gnl|hg17|chr19 (46799310-46800011) | |
| 161-522, gnl|Hg17|chr19 (46952346-46952707) | |
| 161-522, gnl|loxAfr1|scaffold_41980 (12205-12677) | |
| 161-522, gnl|loxAfr1|scaffold_41980 (11867-12688) | |
| 161-522, gnl|loxAfr1|scaffold_41980 (12314-12689) | |
| 161-522, gnl|loxAfr1|scaffold_41980 (12778-12069) | |
| 161-522, gnl|loxAfr1|scaffold_51454 (10809-10183) | |
| 161-522, gnl|loxAfr1|scaffold_78030 (8583-8143) | |
| 161-522, gnl|mm7|chr7 (14845444-14845025) | |
| 161-522, gnl|mm7|chr7 (22311925-22311301) | |
| 161-522, gnl|mm7|chr7 (21568535-21567723) | |
| 161-522, gnl|mm7|chr7 (21568101-21567722) | |
| 161-522, gnl|mm7|chr7 (21568111-21567681) | |
| 161-522, gnl|mm7|chr7 (14915032-14915718) | |
| 161-522, gnl|Mm7|chr7 (21567736-21568097) | |
| 161-522, gnl|monDom2|scaffold_158 (825465-824554) | |
| 161-522, gnl|monDom2|scaffold_158 (824933-824555) | |
| 161-522, gnl|monDom2|scaffold_206 (93006-93487) | |
| 161-522, gnl|monDom2|scaffold_206 (93493-92848) | |
| 161-522, gnl|panTro1|chr20 (45375198-45375682) | |
| 161-522, gnl|panTro1|chr20 (43834731-43835402) | |
| 161-522, gnl|panTro1|chr20 (44948109-44948977) | |
| 161-522, gnl|panTro1|chr20 (44974269-44974653) | |
| 161-522, gnl|panTro1|chr20 (44652609-44653077) | |
| 161-522, gnl|panTro1|chr20 (44653082-44652362) | |
| 161-522, gnl|rheMac2|chr19 (49605368-49605845) | |
| 161-522, gnl|rheMac2|chr19 (48084238-48084906) | |
| 161-522, gnl|rheMac2|chr19 (49200586-49201446) | |
| 161-522, gnl|rheMac2|chr19 (49317918-49318296) | |
| 161-522, gnl|rheMac2|chr19 (48883399-48883846) | |
| 161-522, gnl|rheMac2|chr19 (49653462-49652715) | |
| 161-522, gnl|rn3|chr1 (80149716-80149275) | |
| 161-522, gnl|rn3|chr1 (80836187-80835566) | |
| 161-522, gnl|rn3|chr1 (80150045-80149263) | |
| 161-522, gnl|rn3|chr1 (80149641-80149262) | |
| 161-522, gnl|rn3|chr1 (77524473-77524007) | |
| 161-522, gnl|rn3|chr1 (80836226-80835580) | |
| 525-800, gnl|bosTau2|chr18 (46651416-46651687) | |
| 525-800, gnl|Hg17|chr19 (47715225-47714932) | |
| 525-800, gnl|Mm7|chr7 (22300981-22300700) |
| Aligned organism(s): 64 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 161-522, gnl|bosTau2|chr18 (46686747-46687108) | |
| 161-522, gnl|canFam2|chr1 (114683850-114683378) | |
| 161-522, gnl|canFam2|chr1 (114795436-114796111) | |
| 161-522, gnl|canFam2|chr1 (114663233-114662487) | |
| 161-522, gnl|canFam2|chr1 (114604671-114604294) | |
| 161-522, gnl|canFam2|chr1 (114706030-114705563) | |
| 161-522, gnl|canFam2|chr1 (114662401-114663073) | |
| 161-522, gnl|dasNov1|scaffold_101401 (4247-4714) | |
| 161-522, gnl|dasNov1|scaffold_19961 (45009-45463) | |
| 161-522, gnl|dasNov1|scaffold_19961 (45477-44822) | |
| 161-522, gnl|dasNov1|scaffold_19961 (44638-45475) | |
| 161-522, gnl|dasNov1|scaffold_19961 (45097-45476) | |
| 161-522, gnl|dasNov1|scaffold_41026 (4117-4827) | |
| 161-522, gnl|echTel1|scaffold_206246 (2830-3534) | |
| 161-522, gnl|echTel1|scaffold_283438 (33867-34311) | |
| 161-522, gnl|echTel1|scaffold_285146 (44125-43652) | |
| 161-522, gnl|echTel1|scaffold_285146 (43635-44271) | |
| 161-522, gnl|echTel1|scaffold_285146 (44459-43640) | |
| 161-522, gnl|echTel1|scaffold_285146 (44018-43639) | |
| 161-522, gnl|hg17|chr19 (48220570-48221053) | |
| 161-522, gnl|hg17|chr19 (46952329-46952998) | |
| 161-522, gnl|hg17|chr19 (47959421-47960291) | |
| 161-522, gnl|hg17|chr19 (48073903-48074287) | |
| 161-522, gnl|hg17|chr19 (47756417-47756885) | |
| 161-522, gnl|hg17|chr19 (46799310-46800011) | |
| 161-522, gnl|Hg17|chr19 (46952346-46952707) | |
| 161-522, gnl|loxAfr1|scaffold_41980 (12205-12677) | |
| 161-522, gnl|loxAfr1|scaffold_41980 (11867-12688) | |
| 161-522, gnl|loxAfr1|scaffold_41980 (12314-12689) | |
| 161-522, gnl|loxAfr1|scaffold_41980 (12778-12069) | |
| 161-522, gnl|loxAfr1|scaffold_51454 (10809-10183) | |
| 161-522, gnl|loxAfr1|scaffold_78030 (8583-8143) | |
| 161-522, gnl|mm7|chr7 (14845444-14845025) | |
| 161-522, gnl|mm7|chr7 (22311925-22311301) | |
| 161-522, gnl|mm7|chr7 (21568535-21567723) | |
| 161-522, gnl|mm7|chr7 (21568101-21567722) | |
| 161-522, gnl|mm7|chr7 (21568111-21567681) | |
| 161-522, gnl|mm7|chr7 (14915032-14915718) | |
| 161-522, gnl|Mm7|chr7 (21567736-21568097) | |
| 161-522, gnl|monDom2|scaffold_158 (825465-824554) | |
| 161-522, gnl|monDom2|scaffold_158 (824933-824555) | |
| 161-522, gnl|monDom2|scaffold_206 (93006-93487) | |
| 161-522, gnl|monDom2|scaffold_206 (93493-92848) | |
| 161-522, gnl|panTro1|chr20 (45375198-45375682) | |
| 161-522, gnl|panTro1|chr20 (43834731-43835402) | |
| 161-522, gnl|panTro1|chr20 (44948109-44948977) | |
| 161-522, gnl|panTro1|chr20 (44974269-44974653) | |
| 161-522, gnl|panTro1|chr20 (44652609-44653077) | |
| 161-522, gnl|panTro1|chr20 (44653082-44652362) | |
| 161-522, gnl|rheMac2|chr19 (49605368-49605845) | |
| 161-522, gnl|rheMac2|chr19 (48084238-48084906) | |
| 161-522, gnl|rheMac2|chr19 (49200586-49201446) | |
| 161-522, gnl|rheMac2|chr19 (49317918-49318296) | |
| 161-522, gnl|rheMac2|chr19 (48883399-48883846) | |
| 161-522, gnl|rheMac2|chr19 (49653462-49652715) | |
| 161-522, gnl|rn3|chr1 (80149716-80149275) | |
| 161-522, gnl|rn3|chr1 (80836187-80835566) | |
| 161-522, gnl|rn3|chr1 (80150045-80149263) | |
| 161-522, gnl|rn3|chr1 (80149641-80149262) | |
| 161-522, gnl|rn3|chr1 (77524473-77524007) | |
| 161-522, gnl|rn3|chr1 (80836226-80835580) | |
| 525-800, gnl|bosTau2|chr18 (46651416-46651687) | |
| 525-800, gnl|Hg17|chr19 (47715225-47714932) | |
| 525-800, gnl|Mm7|chr7 (22300981-22300700) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nco (0.646935) | |
| col (0.195008) | |
| duo (0.172801) |