Ss1.1-rnco1927b_e7.5
|
AGGCCAGGTGGTTTGAATGAATAGATGTGCTGTGTTGCCTGCCCATAGAATTGAGCCCAA
TCTCCCATCTCTCTTTTGCTCTCTGTTGCGCTGTGGGAGAGCCTGGTGCTGCCACTCCAG
CATGGATCGCTTTTTCCACAGGCCACATTTTTTATTTACATGAAATTTAACTTTAGTCCT
GGTGAAAAGTTTTCTTTAAATTCTCTTCGACTCACCATCAGTAAGTATTTACTGAGTGCT
TATTAAAGGCCAAGAAATAATCTCCCTAAAAATTGAGTCTACTTTTCATTGGAGTGGATT
TAAGGAAAAATAAATTCTTTTTAATTTTTTGGATGAGGGAAAGAAGTCCTTATTAAGTTT
CCCTTATTACTCTGAAGATAAATTATTCTCTCTCATTAAAAATAAAGTAGAAGCTTTATT
AGCTTCATAAGCATCCTGGAGATAAAAACTAATCTGGTAATACTATACAGAGAAGTTGCC
AGGTTATAGGGCATTTAACCATCTGACTGACCCCTTTCCAGGAAGTATATATTGAAATAA
ATTTATTATTCTCATTTTGGCTAGTAAGGATACAGGAGATTATTTCCAGGGTTGAAAAGA
CATATTTGTGAACTTCATATTAACATGATTCATTGACTCAAACACCAAGGTTCACACGTG
TGTTTTCTCGTAGAGAATGCTGTTATGTAGCCCTGTTTTCCTTTTCATATTTCAAGAAGT
TTTTGAATATGGAGTATGATGTGTAATTGAAAATATGGAATAAAAAATGGAGCCTGTAAA
CAATTTGGAGAAGTGCTCTCTGATGGAATTATAGTTACTTCCTCCCATTCATGTATCAGT
CTGCCTTGGTATATGTTTCTATAAAATTAAAGAGACGTTATGCCTGTTAGGATGGAAGCA
ACGGGCATGTTTGCATTTTCTTTTGATTTCTGTAGTATAGTGCGTGATTTAGAAGCCTCC
AACAATGCAAATGAGGTATATCGTGGAACTCACACTCGGGGGATCTTTTCACTCCGTTTT
GCATGTTTTGAAATGGAGATAAATATGGTGAGGTCTCAGAAGGGAAATGGCCAGAATCCC
CAAAGCCTGTAATATAAGTAAATACGCGTTAAGAATTCTAGATCCATTATACCTAAAGGG |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGGCCAGGTGGTTTGAATGAATAGATGTGCTGTGTTGCCTGCCCATAGAATTGAGCCCAA
TCTCCCATCTCTCTTTTGCTCTCTGTTGCGCTGTGGGAGAGCCTGGTGCTGCCACTCCAG
CATGGATCGCTTTTTCCACAGGCCACATTTTTTATTTACATGAAATTTAACTTTAGTCCT
GGTGAAAAGTTTTCTTTAAATTCTCTTCGACTCACCATCAGTAAGTATTTACTGAGTGCT
TATTAAAGGCCAAGAAATAATCTCCCTAAAAATTGAGTCTACTTTTCATTGGAGTGGATT
TAAGGAAAAATAAATTCTTTTTAATTTTTTGGATGAGGGAAAGAAGTCCTTATTAAGTTT
CCCTTATTACTCTGAAGATAAATTATTCTCTCTCATTAAAAATAAAGTAGAAGCTTTATT
AGCTTCATAAGCATCCTGGAGATAAAAACTAATCTGGTAATACTATACAGAGAAGTTGCC
AGGTTATAGGGCATTTAACCATCTGACTGACCCCTTTCCAGGAAGTATATATTGAAATAA
ATTTATTATTCTCATTTTGGCTAGTAAGGATACAGGAGATTATTTCCAGGGTTGAAAAGA
CATATTTGTGAACTTCATATTAACATGATTCATTGACTCAAACACCAAGGTTCACACGTG
TGTTTTCTCGTAGAGAATGCTGTTATGTAGCCCTGTTTTCCTTTTCATATTTCAAGAAGT
TTTTGAATATGGAGTATGATGTGTAATTGAAAATATGGAATAAAAAATGGAGCCTGTAAA
CAATTTGGAGAAGTGCTCTCTGATGGAATTATAGTTACTTCCTCCCATTCATGTATCAGT
CTGCCTTGGTATATGTTTCTATAAAATTAAAGAGACGTTATGCCTGTTAGGATGGAAGCA
ACGGGCATGTTTGCATTTTCTTTTGATTTCTGTAGTATAGTGCGTGATTTAGAAGCCTCC
AACAATGCAAATGAGGTATATCGTGGAACTCACACTCGGGGGATCTTTTCACTCCGTTTT
GCATGTTTTGAAATGGAGATAAATATGGTGAGGTCTCAGAAGGGAAATGGCCAGAATCCC
CAAAGCCTGTAATATAAGTAAATACGCGTTAAGAATTCTAGATCCATTATACCTAAAGGG |
|
4-501, gnl|bosTau2|chr11 (48993897-48994396) |
| |
|
539-994, gnl|bosTau2|chr11 (48994401-48994852) |
| |
|
1009-1140, gnl|bosTau2|chr11 (48994899-48995030) |
|
1009-1140, gnl|canFam2|chr10 (71223684-71223890) |
|
1009-1140, gnl|dasNov1|scaffold_294772 (776-556) |
|
1009-1140, gnl|echTel1|scaffold_250660 (11634-11864) |
|
1009-1140, gnl|hg17|chr2 (69459047-69459289) |
|
1009-1140, gnl|Hg17|chr2 (69459222-69459101) |
|
1009-1140, gnl|loxAfr1|scaffold_12046 (37747-37504) |
|
1009-1140, gnl|oryCun1|scaffold_175895 (19384-19153) |
|
1009-1140, gnl|panTro1|chr12 (71694190-71694432) |
|
1009-1140, gnl|rheMac2|chr13 (69553979-69554221) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
4-501, gnl|bosTau2|chr11 (48993897-48994396) |
| |
|
539-994, gnl|bosTau2|chr11 (48994401-48994852) |
| |
|
1009-1140, gnl|bosTau2|chr11 (48994899-48995030) |
|
1009-1140, gnl|canFam2|chr10 (71223684-71223890) |
|
1009-1140, gnl|dasNov1|scaffold_294772 (776-556) |
|
1009-1140, gnl|echTel1|scaffold_250660 (11634-11864) |
|
1009-1140, gnl|hg17|chr2 (69459047-69459289) |
|
1009-1140, gnl|Hg17|chr2 (69459222-69459101) |
|
1009-1140, gnl|loxAfr1|scaffold_12046 (37747-37504) |
|
1009-1140, gnl|oryCun1|scaffold_175895 (19384-19153) |
|
1009-1140, gnl|panTro1|chr12 (71694190-71694432) |
|
1009-1140, gnl|rheMac2|chr13 (69553979-69554221) |
|
ova (0.258264) |
|
thg (0.253582) |
|
tra (0.246184) |
|
fcc (0.197785) |
|
fbs (0.175346) |
|
eye (0.170503) |
|
nco (0.161734) |
|
csp (0.161186) |
|
fco (0.157208) |
|
bfe (0.149858) |
|
fat (0.147427) |
|
ski (0.146735) |
|
lyg (0.133103) |
|
nmm (0.132802) |
|
kid (0.129735) |
|
ret (0.128733) |
|
ecc (0.115035) |
|
spc (0.113366) |
|
ova (0.258264) |
|
thg (0.253582) |
|
tra (0.246184) |
|
fcc (0.197785) |
|
fbs (0.175346) |
|
eye (0.170503) |
|
nco (0.161734) |
|
csp (0.161186) |
|
fco (0.157208) |
|
bfe (0.149858) |
|
fat (0.147427) |
|
ski (0.146735) |
|
lyg (0.133103) |
|
nmm (0.132802) |
|
kid (0.129735) |
|
ret (0.128733) |
|
ecc (0.115035) |
|
spc (0.113366) |
