Non-Coding RNA Search

Ss1.1-rnco1927b_l10.5

Sequence:


               
               TAGTTAATCTGTTATACAGTTTATATCTAAATCAGTAGATTTTAAATGATGAAACCTTTT
TCAAACTTAAATTAGTTGAACTCTTATTAAGAAAGAGTTCCTAATACTTGGGCTCTCGTT
TAGTCTGGTAATCCCACTTTCTGGAAGTGGTCATTGTAATTAGTGTTTTGTTGGAGTCTG
ATTCCATTGTGTTTAATGTCTGCTACGTAAAAATGGAAGTAACCTTTCTTTGATCAGATT
AGTGTGTTACTCAAAATGGAAAAGCAAATACTACATTTTCTACTGGAAGATCCTTAATAT
CTAACAGGCACTTATGAGATCACTTGGTAAATTGGTTGCCAATTAAAGTAAAATTCCACC
TAAAAAAAAAAAAAAAAAAAAAAAAGTGGGATTGTGTGATAATTGGGTAGATCATCCTTA
CCAACTTGACAGTATGTGGTTGGCTTGGAGAAACTTTAGATGAGTAAGCTCTATATACTT
TTTGTACTTTACCAAATTATAATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGTTAATCTGTTATACAGTTTATATCTAAATCAGTAGATTTTAAATGATGAAACCTTTT
TCAAACTTAAATTAGTTGAACTCTTATTAAGAAAGAGTTCCTAATACTTGGGCTCTCGTT
TAGTCTGGTAATCCCACTTTCTGGAAGTGGTCATTGTAATTAGTGTTTTGTTGGAGTCTG
ATTCCATTGTGTTTAATGTCTGCTACGTAAAAATGGAAGTAACCTTTCTTTGATCAGATT
AGTGTGTTACTCAAAATGGAAAAGCAAATACTACATTTTCTACTGGAAGATCCTTAATAT
CTAACAGGCACTTATGAGATCACTTGGTAAATTGGTTGCCAATTAAAGTAAAATTCCACC
TAAAAAAAAAAAAAAAAAAAAAAAAGTGGGATTGTGTGATAATTGGGTAGATCATCCTTA
CCAACTTGACAGTATGTGGTTGGCTTGGAGAAACTTTAGATGAGTAAGCTCTATATACTT
TTTGTACTTTACCAAATTATAATA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-465, gnl|bosTau2|chr13 (52820380-52819934)
               

               
               1-465, gnl|Hg17|chr20 (41523826-41524263)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-465, gnl|bosTau2|chr13 (52820380-52819934)
               

               
               1-465, gnl|Hg17|chr20 (41523826-41524263)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               sag (0.182715)
               

               
               nco (0.161734)
               

               
               cty (0.10408)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sag (0.182715)
               

               
               nco (0.161734)
               

               
               cty (0.10408)

	1-465, gnl\|bosTau2\|chr13 (52820380-52819934)
	1-465, gnl\|Hg17\|chr20 (41523826-41524263)