Ss1.1-rnco1932b_l22.5
|
GGAAGTGCTGGCTTCGCCGCGCGGGGCCGCCTCGGCGACGATGTCGTCCGGGCCGGGGAG
CGACAACCCCAGGTCCGGGGGCGCGCGGCGACCGCGGGAGCCCCAGGAGCAGGAGCTGCA
GCGACGCCGGGAGCAGAAACGGCGGCGGCACGACGCGCAGCAGCTGCAGCAACTCAAGCA
CCTGGAGTCCTTTTATGAAAAACCTCCTCCTGGGCTTATCAAGGAAGATGAGGCTAAGCC
AGAAGACTGTATACCAGATGTCCCAGGCAATGAACATGCCAGGGAATTTCTGGCCCACGC
ACCAACCAAAGGACTTTGGATGCCACTGGGGAAAGAAGTCAAAGTCATGCAGTGTTGGCG
TTGTAAACGGTATGGTCACCGAACAGGAGACAAAGAATGCCCTTTCTTTATCAAAGGCAA
CCAAAAGTTAGAACAGTTCAGAGTAGCACATGAAGATCCCATGTATGACATCATACGAGA
GAGATGGTGAATGTCAGTGACTCGGGCAGTTACCAGTGAACTGAAGGTTCACATTAACTA
AATTCCCCAAAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGAAGTGCTGGCTTCGCCGCGCGGGGCCGCCTCGGCGACGATGTCGTCCGGGCCGGGGAG
CGACAACCCCAGGTCCGGGGGCGCGCGGCGACCGCGGGAGCCCCAGGAGCAGGAGCTGCA
GCGACGCCGGGAGCAGAAACGGCGGCGGCACGACGCGCAGCAGCTGCAGCAACTCAAGCA
CCTGGAGTCCTTTTATGAAAAACCTCCTCCTGGGCTTATCAAGGAAGATGAGGCTAAGCC
AGAAGACTGTATACCAGATGTCCCAGGCAATGAACATGCCAGGGAATTTCTGGCCCACGC
ACCAACCAAAGGACTTTGGATGCCACTGGGGAAAGAAGTCAAAGTCATGCAGTGTTGGCG
TTGTAAACGGTATGGTCACCGAACAGGAGACAAAGAATGCCCTTTCTTTATCAAAGGCAA
CCAAAAGTTAGAACAGTTCAGAGTAGCACATGAAGATCCCATGTATGACATCATACGAGA
GAGATGGTGAATGTCAGTGACTCGGGCAGTTACCAGTGAACTGAAGGTTCACATTAACTA
AATTCCCCAAAG
|
|
gi|51105880|gb|EAL24464.1| |
Protein identifier
|
gi|51105880|gb|EAL24464.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
21-192, gnl|bosTau2|chr4 (34609323-34609151) |
|
21-192, gnl|canFam2|chr14 (48148473-48148648) |
|
21-192, gnl|dasNov1|scaffold_8101 (32126-31935) |
|
21-192, gnl|echTel1|scaffold_149162 (727-880) |
|
21-192, gnl|hg17|chr7 (32755723-32755904) |
|
21-192, gnl|Hg17|chr7 (32922267-32922073) |
|
21-192, gnl|loxAfr1|scaffold_1813 (55300-55158) |
|
21-192, gnl|mm7|chr9 (22346888-22347042) |
|
21-192, gnl|Mm7|chr9 (22347031-22346887) |
|
21-192, gnl|oryCun1|scaffold_178475 (123038-122854) |
|
21-192, gnl|panTro1|chr6 (33867325-33867506) |
|
21-192, gnl|rheMac2|chr3 (93229048-93228867) |
| |
|
215-366, gnl|bosTau2|chr4 (34604007-34603856) |
|
215-366, gnl|Hg17|chr7 (32912297-32912146) |
|
215-366, gnl|Mm7|chr9 (22336324-22336173) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
21-192, gnl|bosTau2|chr4 (34609323-34609151) |
|
21-192, gnl|canFam2|chr14 (48148473-48148648) |
|
21-192, gnl|dasNov1|scaffold_8101 (32126-31935) |
|
21-192, gnl|echTel1|scaffold_149162 (727-880) |
|
21-192, gnl|hg17|chr7 (32755723-32755904) |
|
21-192, gnl|Hg17|chr7 (32922267-32922073) |
|
21-192, gnl|loxAfr1|scaffold_1813 (55300-55158) |
|
21-192, gnl|mm7|chr9 (22346888-22347042) |
|
21-192, gnl|Mm7|chr9 (22347031-22346887) |
|
21-192, gnl|oryCun1|scaffold_178475 (123038-122854) |
|
21-192, gnl|panTro1|chr6 (33867325-33867506) |
|
21-192, gnl|rheMac2|chr3 (93229048-93228867) |
| |
|
215-366, gnl|bosTau2|chr4 (34604007-34603856) |
|
215-366, gnl|Hg17|chr7 (32912297-32912146) |
|
215-366, gnl|Mm7|chr9 (22336324-22336173) |
|
cje (0.165235) |
|
nco (0.161734) |
|
isp (0.150376) |
|
thg (0.126791) |
|
eje (0.0988338) |
|
cje (0.165235) |
|
nco (0.161734) |
|
isp (0.150376) |
|
thg (0.126791) |
|
eje (0.0988338) |
