Ss1.1-rnco1934b_l17.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAAAAGTCTGGCAGAGAAGCTCTATCTGTTTCAGTACCCTGTGCGTCCAGCCTCGATGAC CTACGATGACATTCCGCACCTCTCAGCCAAGATCAAGCCCAAGCAGCAGAAGGTAGAGCT CGAGATGGCCATCGACACGCTGAATCCCAACTACTGCCGCAGCAAAGGGGAGCAGATCGC GCTGAACGTGGATGGCGCCTGTGCTGACGAGACGAGCACCTACTCCTCGAAGCTGATGGA CAAGCAGACGTTCTGCTCTTCGCAGACCACCAGCAACACCTCCCGTTACGCTGCTGCGCT CTACAGGCAAGGTGAGCTCCACCTGACACCTTTACATGGCATCCTGCAGCTGCGGCCCAG CTTCTCCTACCTGGATAAGGCTGACGCCAAGCACCGTGAGAGGGAGGCCGCTAATGAGGC AGGAGACTCTTCACAGGACGAGGCAGAAGAAGATGTGAAGCAGATCACGGTGCGATTCTC CCGGCCGGAGTCGGAGCAGGCCCGCCAGCGGCGCGTGCAATCCTATGAGTTCCTGCAGAA GAAGCATGCCGAGGAGCCCTGGGTGCACCTGCACTACTGCGGCCTGAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAAAAGTCTGGCAGAGAAGCTCTATCTGTTTCAGTACCCTGTGCGTCCAGCCTCGATGAC CTACGATGACATTCCGCACCTCTCAGCCAAGATCAAGCCCAAGCAGCAGAAGGTAGAGCT CGAGATGGCCATCGACACGCTGAATCCCAACTACTGCCGCAGCAAAGGGGAGCAGATCGC GCTGAACGTGGATGGCGCCTGTGCTGACGAGACGAGCACCTACTCCTCGAAGCTGATGGA CAAGCAGACGTTCTGCTCTTCGCAGACCACCAGCAACACCTCCCGTTACGCTGCTGCGCT CTACAGGCAAGGTGAGCTCCACCTGACACCTTTACATGGCATCCTGCAGCTGCGGCCCAG CTTCTCCTACCTGGATAAGGCTGACGCCAAGCACCGTGAGAGGGAGGCCGCTAATGAGGC AGGAGACTCTTCACAGGACGAGGCAGAAGAAGATGTGAAGCAGATCACGGTGCGATTCTC CCGGCCGGAGTCGGAGCAGGCCCGCCAGCGGCGCGTGCAATCCTATGAGTTCCTGCAGAA GAAGCATGCCGAGGAGCCCTGGGTGCACCTGCACTACTGCGGCCTGAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 111-229, gnl|bosTau2|chr25 (18744722-18744604) | |
| 111-229, gnl|canFam2|chr6 (26376999-26376850) | |
| 111-229, gnl|danRer3|chrNA (90188528-90188399) | |
| 111-229, gnl|dasNov1|scaffold_8039 (12528-12378) | |
| 111-229, gnl|echTel1|scaffold_278787 (36914-36772) | |
| 111-229, gnl|fr1|chrUn (308059816-308059688) | |
| 111-229, gnl|galGal2|chr14 (10859299-10859431) | |
| 111-229, gnl|hg17|chr16 (22227728-22227875) | |
| 111-229, gnl|Hg17|chr16 (22227745-22227863) | |
| 111-229, gnl|loxAfr1|scaffold_47828 (29905-30054) | |
| 111-229, gnl|mm7|chr7 (116850152-116850299) | |
| 111-229, gnl|Mm7|chr7 (116850169-116850287) | |
| 111-229, gnl|monDom2|scaffold_19 (42755579-42755733) | |
| 111-229, gnl|oryCun1|scaffold_205284 (186094-186242) | |
| 111-229, gnl|panTro1|chr18_random (10390011-10390158) | |
| 111-229, gnl|rheMac2|chr20 (20726278-20726425) | |
| 111-229, gnl|rn3|chr1 (179916963-179917110) | |
| 111-229, gnl|tetNig1|chrUn_random (99918195-99918322) | |
| 307-419, gnl|bosTau2|chr25 (18741117-18741005) | |
| 307-419, gnl|Hg17|chr16 (22232437-22232549) | |
| 307-419, gnl|Mm7|chr7 (116853157-116853269) | |
| 469-588, gnl|bosTau2|chr25 (18740345-18740226) | |
| 469-588, gnl|canFam2|chr6 (26371532-26371378) | |
| 469-588, gnl|danRer3|chrNA (90184450-90184304) | |
| 469-588, gnl|dasNov1|scaffold_8039 (6018-5882) | |
| 469-588, gnl|echTel1|scaffold_278787 (33292-33128) | |
| 469-588, gnl|fr1|chrUn (308058784-308058650) | |
| 469-588, gnl|galGal2|chr14 (10862192-10862333) | |
| 469-588, gnl|hg17|chr16 (22233886-22234049) | |
| 469-588, gnl|Hg17|chr16 (22233910-22234029) | |
| 469-588, gnl|loxAfr1|scaffold_143978 (3697-3872) | |
| 469-588, gnl|mm7|chr7 (116854396-116854551) | |
| 469-588, gnl|Mm7|chr7 (116854416-116854535) | |
| 469-588, gnl|monDom2|scaffold_19 (42760099-42760259) | |
| 469-588, gnl|panTro1|chr18_random (10396555-10396718) | |
| 469-588, gnl|rheMac2|chr20 (20732846-20733019) | |
| 469-588, gnl|rn3|chr1 (179921241-179921395) | |
| 469-588, gnl|tetNig1|chrUn_random (99919241-99919374) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 111-229, gnl|bosTau2|chr25 (18744722-18744604) | |
| 111-229, gnl|canFam2|chr6 (26376999-26376850) | |
| 111-229, gnl|danRer3|chrNA (90188528-90188399) | |
| 111-229, gnl|dasNov1|scaffold_8039 (12528-12378) | |
| 111-229, gnl|echTel1|scaffold_278787 (36914-36772) | |
| 111-229, gnl|fr1|chrUn (308059816-308059688) | |
| 111-229, gnl|galGal2|chr14 (10859299-10859431) | |
| 111-229, gnl|hg17|chr16 (22227728-22227875) | |
| 111-229, gnl|Hg17|chr16 (22227745-22227863) | |
| 111-229, gnl|loxAfr1|scaffold_47828 (29905-30054) | |
| 111-229, gnl|mm7|chr7 (116850152-116850299) | |
| 111-229, gnl|Mm7|chr7 (116850169-116850287) | |
| 111-229, gnl|monDom2|scaffold_19 (42755579-42755733) | |
| 111-229, gnl|oryCun1|scaffold_205284 (186094-186242) | |
| 111-229, gnl|panTro1|chr18_random (10390011-10390158) | |
| 111-229, gnl|rheMac2|chr20 (20726278-20726425) | |
| 111-229, gnl|rn3|chr1 (179916963-179917110) | |
| 111-229, gnl|tetNig1|chrUn_random (99918195-99918322) | |
| 307-419, gnl|bosTau2|chr25 (18741117-18741005) | |
| 307-419, gnl|Hg17|chr16 (22232437-22232549) | |
| 307-419, gnl|Mm7|chr7 (116853157-116853269) | |
| 469-588, gnl|bosTau2|chr25 (18740345-18740226) | |
| 469-588, gnl|canFam2|chr6 (26371532-26371378) | |
| 469-588, gnl|danRer3|chrNA (90184450-90184304) | |
| 469-588, gnl|dasNov1|scaffold_8039 (6018-5882) | |
| 469-588, gnl|echTel1|scaffold_278787 (33292-33128) | |
| 469-588, gnl|fr1|chrUn (308058784-308058650) | |
| 469-588, gnl|galGal2|chr14 (10862192-10862333) | |
| 469-588, gnl|hg17|chr16 (22233886-22234049) | |
| 469-588, gnl|Hg17|chr16 (22233910-22234029) | |
| 469-588, gnl|loxAfr1|scaffold_143978 (3697-3872) | |
| 469-588, gnl|mm7|chr7 (116854396-116854551) | |
| 469-588, gnl|Mm7|chr7 (116854416-116854535) | |
| 469-588, gnl|monDom2|scaffold_19 (42760099-42760259) | |
| 469-588, gnl|panTro1|chr18_random (10396555-10396718) | |
| 469-588, gnl|rheMac2|chr20 (20732846-20733019) | |
| 469-588, gnl|rn3|chr1 (179921241-179921395) | |
| 469-588, gnl|tetNig1|chrUn_random (99919241-99919374) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nco (0.161734) | |
| jca (0.11396) |