Non-Coding RNA Search

Ss1.1-rnco1935b_g13.5

Sequence:


               
               AGCGCTCCCAGCGGAGGCGTGCCCGGCATTCCCTGGTATGAGCTGCAGCGATGGGGAAGG
CAACTAGAGATCAGACTTACTTCCAGAGGAGCAGTCTGTTTTGGGTCACCATCATCACCG
TCTCCTTTGGCTATTACACGGTAAGGGCAGCGGCCTCCAAGAAAGACCAAGCGAGGCAAC
AGAGCGCTCCCTTCAGCTGTGAAATCAACCCTACCTGCTAGGCGGGAGAGATCGCGCAGG
CGCAATCGCACTCCCGCGGCGCTGTGAGCCCGGGGATTATACCCGGGACCATGGTATTGT
GCAAGTCTAAAGGCATCACAAATACTTCCACTCAACTACTCTGGTTCCTACAGACATTCC
TCTTTGGGATGGCATCTCTCTATTACTTGATTACTTACAGACCAAGACGCCAAAAACAAA
CTTAAAGAAGATATCAAAAAAAAAATTGAATCACTGTTTTGTACACCTTAAACTAATATT
ATATTGTATTTCAACTGTACTTTCATTTAAAAGGAGAAAATATAGCATATAAAGTTCCTA
AGGGAAGACAAAAAAAAAAAAAAAGGGGGGGGCCGTTTTAAATTTTCCTTGGGGGGGCCA
AATTTTACCCTTCCCCATTTTTTTGGAAAAAGGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCGCTCCCAGCGGAGGCGTGCCCGGCATTCCCTGGTATGAGCTGCAGCGATGGGGAAGG
CAACTAGAGATCAGACTTACTTCCAGAGGAGCAGTCTGTTTTGGGTCACCATCATCACCG
TCTCCTTTGGCTATTACACGGTAAGGGCAGCGGCCTCCAAGAAAGACCAAGCGAGGCAAC
AGAGCGCTCCCTTCAGCTGTGAAATCAACCCTACCTGCTAGGCGGGAGAGATCGCGCAGG
CGCAATCGCACTCCCGCGGCGCTGTGAGCCCGGGGATTATACCCGGGACCATGGTATTGT
GCAAGTCTAAAGGCATCACAAATACTTCCACTCAACTACTCTGGTTCCTACAGACATTCC
TCTTTGGGATGGCATCTCTCTATTACTTGATTACTTACAGACCAAGACGCCAAAAACAAA
CTTAAAGAAGATATCAAAAAAAAAATTGAATCACTGTTTTGTACACCTTAAACTAATATT
ATATTGTATTTCAACTGTACTTTCATTTAAAAGGAGAAAATATAGCATATAAAGTTCCTA
AGGGAAGACAAAAAAAAAAAAAAAGGGGGGGGCCGTTTTAAATTTTCCTTGGGGGGGCCA
AATTTTACCCTTCCCCATTTTTTTGGAAAAAGGGGG

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               289-565, gnl|bosTau2|chr1 (58035198-58035471)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               289-565, gnl|bosTau2|chr1 (58035198-58035471)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nco (0.161734)
               

               
               nmm (0.132802)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nco (0.161734)
               

               
               nmm (0.132802)