Non-Coding RNA Search

Ss1.1-rnco1935b_o18.5

Sequence:


               
               CGACCATGCAGCATTGCATAAGAGTAAATGAAAAATGGAAGGGAGAATTTCTGGGTGTAT
TGGAAGGCCCCCCCCCCCAATTTTGAGTGTTGCCATTTTTCAAAGACTTGGCTTTTTTTA
AGAATCAGTGTATCTCTAAATGACATGTCCCTTCCTTGTAATCCTCTGCCTCAGAAAAGA
AAAGCCTAGTCAGACTTATTTCCAGTAACAAAACAAGAATTAGTTTAATCCTGTTACCTT
AACTATAGAATTCCCATTCATTTCATGAATGAGGGTACATCTTATGGACAGAACCACAGT
TATTGTCCTGCAGCTTCCTGTAACTATACTCACGACTATTAAAATTGCGTGAAATTTACA
TTTTATTCTGTCTGCAAATTTCTGGGCTTTTAATTTTCTGGGATATGTGGGAGCTTTAGT
TAGTACATACAATTCTTTTTGTACTTCCACATGAATAAGCAAAATACCAGCAATTGCTTA
GATTTTAATGAATCTTTAAAAGCTCAAAAATCATTGAAATTATTTCCAGAGATAGATTTC
CATTTTTAGATTGAACACATTTTTTAAAACCAGTTAATGTTTGCTATTAAAATATTTACA
CTTTTAGAATATGTGCATGTTGCCAAGACTCAAGTAAAACAGGGATATCAACTGTGAAGG
GCCTAACCTCTCAAAAATAAGAGAATAAATATACTTATGAAATAAAAATTTCCATTGATT
CTTGCACATTTATGCAACTAAGATTATTTAGAGGGAACTTGTTAAATTAGCCAACACAAT
ACATTTTTTGGTGGGCTTTGAAGTTCTTTGGGAAGAAAGCTCACTTAAAAGTTGATGCAT
TTTAAACTCGTCACACTGCCGCCTTACTTGTCTGTGGAAATGAAATGTCTGAAGTGAACT
GGCAGTGGTGTGGAGTTGTTGGACCTTTAAAAAGAGCAATACAGATTCCTACGTTGTCAT
TTTGTCTTCTGTTAAGTACAAGTATGTCTCTATTACTGANCATGCAAAAATAGGGTAAAA
TTGGCTTGCAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGACCATGCAGCATTGCATAAGAGTAAATGAAAAATGGAAGGGAGAATTTCTGGGTGTAT
TGGAAGGCCCCCCCCCCCAATTTTGAGTGTTGCCATTTTTCAAAGACTTGGCTTTTTTTA
AGAATCAGTGTATCTCTAAATGACATGTCCCTTCCTTGTAATCCTCTGCCTCAGAAAAGA
AAAGCCTAGTCAGACTTATTTCCAGTAACAAAACAAGAATTAGTTTAATCCTGTTACCTT
AACTATAGAATTCCCATTCATTTCATGAATGAGGGTACATCTTATGGACAGAACCACAGT
TATTGTCCTGCAGCTTCCTGTAACTATACTCACGACTATTAAAATTGCGTGAAATTTACA
TTTTATTCTGTCTGCAAATTTCTGGGCTTTTAATTTTCTGGGATATGTGGGAGCTTTAGT
TAGTACATACAATTCTTTTTGTACTTCCACATGAATAAGCAAAATACCAGCAATTGCTTA
GATTTTAATGAATCTTTAAAAGCTCAAAAATCATTGAAATTATTTCCAGAGATAGATTTC
CATTTTTAGATTGAACACATTTTTTAAAACCAGTTAATGTTTGCTATTAAAATATTTACA
CTTTTAGAATATGTGCATGTTGCCAAGACTCAAGTAAAACAGGGATATCAACTGTGAAGG
GCCTAACCTCTCAAAAATAAGAGAATAAATATACTTATGAAATAAAAATTTCCATTGATT
CTTGCACATTTATGCAACTAAGATTATTTAGAGGGAACTTGTTAAATTAGCCAACACAAT
ACATTTTTTGGTGGGCTTTGAAGTTCTTTGGGAAGAAAGCTCACTTAAAAGTTGATGCAT
TTTAAACTCGTCACACTGCCGCCTTACTTGTCTGTGGAAATGAAATGTCTGAAGTGAACT
GGCAGTGGTGTGGAGTTGTTGGACCTTTAAAAAGAGCAATACAGATTCCTACGTTGTCAT
TTTGTCTTCTGTTAAGTACAAGTATGTCTCTATTACTGANCATGCAAAAATAGGGTAAAA
TTGGCTTGCAGA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               127-1018, gnl|bosTau2|chr25 (9898340-9897460)
               

               
               127-1018, gnl|Hg17|chr16 (11873046-11871853)
               

               
               127-1018, gnl|Mm7|chr16 (10898699-10897931)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               127-1018, gnl|bosTau2|chr25 (9898340-9897460)
               

               
               127-1018, gnl|Hg17|chr16 (11873046-11871853)
               

               
               127-1018, gnl|Mm7|chr16 (10898699-10897931)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nco (0.161734)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nco (0.161734)

	127-1018, gnl\|bosTau2\|chr25 (9898340-9897460)
	127-1018, gnl\|Hg17\|chr16 (11873046-11871853)
	127-1018, gnl\|Mm7\|chr16 (10898699-10897931)