Ss1.1-rnep07c_d15.5
|
TGGGGGCGGGTGGAGCAGCTGGTGCTGTACATGAAGGCCGCGCAGCTGCTGGCGGCGTCT
CTGCATCTCGCCAAGGAGCAGATCAAGTCCGGGAAGCTGAGCCCGTCCACGGGCGTCAAA
CAAGTTGTCAAAAATCTGAATGAACGATATAAATTCTGCATCACCATGTGCAAGAAACTT
ACAGAGAAGCTGCATCGCTTTTTCTCTGACAAGCAGAGGTTTATCGATGAAATCAACAGC
GTGACCGCAGAGAAACTCATCTATAATTGTGCTGTGGAGATGGTCCAGGCTGCAGCCCTG
GACGAGATGTTTCAGCAGACAGAGGACATCGTGTGTCGCTATCACAAGGCGGCGCTGCTC
CTGGAGGGCCTGGCCAAGATTCTGCAGGACCCGGCGGAGGTCGAGAACGTGCACAAATAT
AAATCCAGCATCGAGAGAAGACTCTCTGCCCTCTGTTGTAGCAGCTCAACCACATGCAGA
GGTGAGATGACCCCACGGGGCTCTCTCCTCCTAAAAAGTGCTAACTTT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGGGGGCGGGTGGAGCAGCTGGTGCTGTACATGAAGGCCGCGCAGCTGCTGGCGGCGTCT
CTGCATCTCGCCAAGGAGCAGATCAAGTCCGGGAAGCTGAGCCCGTCCACGGGCGTCAAA
CAAGTTGTCAAAAATCTGAATGAACGATATAAATTCTGCATCACCATGTGCAAGAAACTT
ACAGAGAAGCTGCATCGCTTTTTCTCTGACAAGCAGAGGTTTATCGATGAAATCAACAGC
GTGACCGCAGAGAAACTCATCTATAATTGTGCTGTGGAGATGGTCCAGGCTGCAGCCCTG
GACGAGATGTTTCAGCAGACAGAGGACATCGTGTGTCGCTATCACAAGGCGGCGCTGCTC
CTGGAGGGCCTGGCCAAGATTCTGCAGGACCCGGCGGAGGTCGAGAACGTGCACAAATAT
AAATCCAGCATCGAGAGAAGACTCTCTGCCCTCTGTTGTAGCAGCTCAACCACATGCAGA
GGTGAGATGACCCCACGGGGCTCTCTCCTCCTAAAAAGTGCTAACTTT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
123-284, gnl|bosTau2|chr19 (24579251-24579412) |
|
123-284, gnl|canFam2|chr5 (43432029-43431859) |
|
123-284, gnl|danRer3|chr15 (25251127-25251305) |
|
123-284, gnl|dasNov1|scaffold_62161 (5245-5089) |
|
123-284, gnl|echTel1|scaffold_301834 (6079-5910) |
|
123-284, gnl|fr1|chrUn (159690230-159690060) |
|
123-284, gnl|galGal2|chr19 (6408639-6408471) |
|
123-284, gnl|hg17|chr17 (19624376-19624546) |
|
123-284, gnl|Hg17|chr17 (19624536-19624375) |
|
123-284, gnl|loxAfr1|scaffold_12143 (40507-40339) |
|
123-284, gnl|mm7|chr11 (61863149-61863319) |
|
123-284, gnl|Mm7|chr11 (61863309-61863148) |
|
123-284, gnl|monDom2|scaffold_86 (4492643-4492475) |
|
123-284, gnl|oryCun1|scaffold_179941 (13663-13493) |
|
123-284, gnl|panTro1|chr19 (19953462-19953632) |
|
123-284, gnl|rheMac2|chr16 (19297680-19297849) |
|
123-284, gnl|rn3|chr10 (47951104-47951274) |
|
123-284, gnl|tetNig1|chr16 (8367353-8367523) |
|
123-284, gnl|xenTro1|scaffold_38 (1210487-1210657) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
123-284, gnl|bosTau2|chr19 (24579251-24579412) |
|
123-284, gnl|canFam2|chr5 (43432029-43431859) |
|
123-284, gnl|danRer3|chr15 (25251127-25251305) |
|
123-284, gnl|dasNov1|scaffold_62161 (5245-5089) |
|
123-284, gnl|echTel1|scaffold_301834 (6079-5910) |
|
123-284, gnl|fr1|chrUn (159690230-159690060) |
|
123-284, gnl|galGal2|chr19 (6408639-6408471) |
|
123-284, gnl|hg17|chr17 (19624376-19624546) |
|
123-284, gnl|Hg17|chr17 (19624536-19624375) |
|
123-284, gnl|loxAfr1|scaffold_12143 (40507-40339) |
|
123-284, gnl|mm7|chr11 (61863149-61863319) |
|
123-284, gnl|Mm7|chr11 (61863309-61863148) |
|
123-284, gnl|monDom2|scaffold_86 (4492643-4492475) |
|
123-284, gnl|oryCun1|scaffold_179941 (13663-13493) |
|
123-284, gnl|panTro1|chr19 (19953462-19953632) |
|
123-284, gnl|rheMac2|chr16 (19297680-19297849) |
|
123-284, gnl|rn3|chr10 (47951104-47951274) |
|
123-284, gnl|tetNig1|chr16 (8367353-8367523) |
|
123-284, gnl|xenTro1|scaffold_38 (1210487-1210657) |
|
mas (0.210305) |
|
nep (0.183925) |
|
lnt (0.142308) |
|
mas (0.210305) |
|
nep (0.183925) |
|
lnt (0.142308) |
