Non-Coding RNA Search

Ss1.1-rnep08c_a7.5

Sequence:


               
               ATGGCCAGTCCTCTGGAGCAGGGGTTGGCTGCGGTCCTGTGCACCTTCCAGGAATATTCG
GGGCGCTGCGGGGACAAGCACAAGCTCTGCCAGGCGGAGCTCAAGGAGCTGCTGCAGAAG
GAGCTGCCCACCTGGACCCCGACGGAGCTCCGGGAGTGTGACTACAATAAGTTCATGAGT
GTCCTGGACTCCGACAAGGATGGCGAGGTGGACTTCGTGGAGTACGTGCGCTCCCTCGCC
TGCCTCTGCACCTACTGCCACGAGTACTTCAAGGATTGCCCCCCGGAGCCCCCCTGCTCC
CAGTAACGGGGCCAGCAGGGGTCTGAGTCTGCTCTGAGACCTGCCCCATCTCTGCTCTGA
GATCGTCCTGCACCTGTCAGCTCTCCCCTCCACCCCCCGCGTCCCCTCCATCCAGGGCCC
CTGAGTCCAGGAGACCTGAGGGACCTTCCCCAGGACCACAGCTAGTGACCCGGAGAGCAG
CCAGTTGCTGCCTCCCCTCTGTGGCCTGAGATGGCACAGGCCAGGGGTCTGCCCCGAGGC
TGTCAAGTCCCAGCAGAGTGTGTGCAGGAAGGAGACCTACGGCGGGAAAAGGGCCTATTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGGCCAGTCCTCTGGAGCAGGGGTTGGCTGCGGTCCTGTGCACCTTCCAGGAATATTCG
GGGCGCTGCGGGGACAAGCACAAGCTCTGCCAGGCGGAGCTCAAGGAGCTGCTGCAGAAG
GAGCTGCCCACCTGGACCCCGACGGAGCTCCGGGAGTGTGACTACAATAAGTTCATGAGT
GTCCTGGACTCCGACAAGGATGGCGAGGTGGACTTCGTGGAGTACGTGCGCTCCCTCGCC
TGCCTCTGCACCTACTGCCACGAGTACTTCAAGGATTGCCCCCCGGAGCCCCCCTGCTCC
CAGTAACGGGGCCAGCAGGGGTCTGAGTCTGCTCTGAGACCTGCCCCATCTCTGCTCTGA
GATCGTCCTGCACCTGTCAGCTCTCCCCTCCACCCCCCGCGTCCCCTCCATCCAGGGCCC
CTGAGTCCAGGAGACCTGAGGGACCTTCCCCAGGACCACAGCTAGTGACCCGGAGAGCAG
CCAGTTGCTGCCTCCCCTCTGTGGCCTGAGATGGCACAGGCCAGGGGTCTGCCCCGAGGC
TGTCAAGTCCCAGCAGAGTGTGTGCAGGAAGGAGACCTACGGCGGGAAAAGGGCCTATTT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q6FGE4_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q6FGE4_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               127-497, gnl|bosTau2|chr3 (11225976-11226347)
               

               
               127-497, gnl|Hg17|chr1 (150333433-150333009)
               

               
               127-497, gnl|Mm7|chr3 (90732374-90732802)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               127-497, gnl|bosTau2|chr3 (11225976-11226347)
               

               
               127-497, gnl|Hg17|chr1 (150333433-150333009)
               

               
               127-497, gnl|Mm7|chr3 (90732374-90732802)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nep (1.4714)
               

               
               ton (0.1755)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (1.4714)
               

               
               ton (0.1755)

	127-497, gnl\|bosTau2\|chr3 (11225976-11226347)
	127-497, gnl\|Hg17\|chr1 (150333433-150333009)
	127-497, gnl\|Mm7\|chr3 (90732374-90732802)