Non-Coding RNA Search

Ss1.1-rnep08c_g10.5

Sequence:


               
               TCTGTCTCCATCATCACCGTTGCACACCTACACCTCTGTCTCCATCATCACCGTTGCAGT
CCCGCAGCCATGTCCTACCCAGTGACCAGTCAGCCCCAGTGTGCCAGCGGTTGCTACCAG
ACCCAGCTCAGTGACTGGCACACCGGTCTCACGGACTGCTGCAATGACATGCCCATCTGT
CTGTGCGGCACTTTCGCCCCTCTGTGCCTCGCCTGCCGCATCTCCGACGACTTCGGCGAG
TGCTGCTGCGCGCCCTACCTGCCCGGAGGCCTGCACTCCCTGCGCACCGGCATGCGCGAG
CGCTATCACATCCAGGGCTCTGTCGGGCACGACTGGGCGGCCCTCACCTTCTGCTTGCCC
TGCGCCCTCTGTCAGATGGCGCGGGAACTGAAGATCCGAGAGTAAAGCTCCTTGATCCCT
CTCCTTCCCCATCCGCCCTTCTCCGTCCTCTCTTGGGAGGTCCTGCCCCTCCGCCCTCTC
CCGCCACCAGAAACGCACCCACAATTAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTGTCTCCATCATCACCGTTGCACACCTACACCTCTGTCTCCATCATCACCGTTGCAGT
CCCGCAGCCATGTCCTACCCAGTGACCAGTCAGCCCCAGTGTGCCAGCGGTTGCTACCAG
ACCCAGCTCAGTGACTGGCACACCGGTCTCACGGACTGCTGCAATGACATGCCCATCTGT
CTGTGCGGCACTTTCGCCCCTCTGTGCCTCGCCTGCCGCATCTCCGACGACTTCGGCGAG
TGCTGCTGCGCGCCCTACCTGCCCGGAGGCCTGCACTCCCTGCGCACCGGCATGCGCGAG
CGCTATCACATCCAGGGCTCTGTCGGGCACGACTGGGCGGCCCTCACCTTCTGCTTGCCC
TGCGCCCTCTGTCAGATGGCGCGGGAACTGAAGATCCGAGAGTAAAGCTCCTTGATCCCT
CTCCTTCCCCATCCGCCCTTCTCCGTCCTCTCTTGGGAGGTCCTGCCCCTCCGCCCTCTC
CCGCCACCAGAAACGCACCCACAATTAAAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|37590226|gb|AAH59093.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|37590226|gb|AAH59093.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               179-316, gnl|bosTau2|chr18 (45070396-45070259)
               

               
               179-316, gnl|Hg17|chr19 (47583468-47583331)
               

               
               179-316, gnl|Mm7|chr7 (22157905-22157768)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               179-316, gnl|bosTau2|chr18 (45070396-45070259)
               

               
               179-316, gnl|Hg17|chr19 (47583468-47583331)
               

               
               179-316, gnl|Mm7|chr7 (22157905-22157768)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               ton (3.6855)
               

               
               nep (0.551775)
               

               
               nje (0.16592)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ton (3.6855)
               

               
               nep (0.551775)
               

               
               nje (0.16592)

	179-316, gnl\|bosTau2\|chr18 (45070396-45070259)
	179-316, gnl\|Hg17\|chr19 (47583468-47583331)
	179-316, gnl\|Mm7\|chr7 (22157905-22157768)