Ss1.1-rnep09c_e6.5
|
CTCTGACCCGCCGGCCGCCCTTGAGCCCGGGTCGCGGGGCCAGGAAGCCGGAGCCCGGGC
CCTTGAAGCAGAGCGGCCGCCATGGCCAAGTACCTGGCCCAGATCATCGTGATGGGCGTG
CAGGTGGTGGGTAGGGCCTTTGCCCGCGCCCTGCGCCAGGAGTTTGCAGCCAGCCGGGCA
GCAGCTGATGCACGGGGACGTGCCGGACACCAGTCTGCAGCCGCCTCCAACCTCTCTGGC
CTCAGCCTCCAGGAGGCCCAGCAGATTCTCAATGTCTCCAAGCTGAGCCCCGAGGAGATC
CAGAAGAACTACGAACACCTCTTCAAAGTGAATGACAAATCCGTGGGTGGCTCCTTCTAC
CTGCAGTCAAAGGTGGTCCGCGCGAAGGAGCGGCTTGAGGAGGAACTCCGCATCCAGGCC
CAGGAGGACAGAGAGCGCCAGCAGACGCCCGGAACGTGACCCCACGGCTCGGCCCGCCCC
ACCCTGCCCGCCACCTCTAATTTATAGCTCGGTAATAAATGTCTTCTCGGAAAACGTAAG
CTACGATAGAAAAAGGCACTTAGAACCTGTTAAAATACTGACATCCTGGAATGTGCAACA
ACAAACCAACAACAACAACACGTACACCGGCCCCTGGGGACCTGGTCTGTCACCGAGTCA
CATGCTGAGCTA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTCTGACCCGCCGGCCGCCCTTGAGCCCGGGTCGCGGGGCCAGGAAGCCGGAGCCCGGGC
CCTTGAAGCAGAGCGGCCGCCATGGCCAAGTACCTGGCCCAGATCATCGTGATGGGCGTG
CAGGTGGTGGGTAGGGCCTTTGCCCGCGCCCTGCGCCAGGAGTTTGCAGCCAGCCGGGCA
GCAGCTGATGCACGGGGACGTGCCGGACACCAGTCTGCAGCCGCCTCCAACCTCTCTGGC
CTCAGCCTCCAGGAGGCCCAGCAGATTCTCAATGTCTCCAAGCTGAGCCCCGAGGAGATC
CAGAAGAACTACGAACACCTCTTCAAAGTGAATGACAAATCCGTGGGTGGCTCCTTCTAC
CTGCAGTCAAAGGTGGTCCGCGCGAAGGAGCGGCTTGAGGAGGAACTCCGCATCCAGGCC
CAGGAGGACAGAGAGCGCCAGCAGACGCCCGGAACGTGACCCCACGGCTCGGCCCGCCCC
ACCCTGCCCGCCACCTCTAATTTATAGCTCGGTAATAAATGTCTTCTCGGAAAACGTAAG
CTACGATAGAAAAAGGCACTTAGAACCTGTTAAAATACTGACATCCTGGAATGTGCAACA
ACAAACCAACAACAACAACACGTACACCGGCCCCTGGGGACCTGGTCTGTCACCGAGTCA
CATGCTGAGCTA
|
|
15-223, gnl|bosTau2|chr27 (21670788-21670587) |
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15-223, gnl|Mm7|chr10 (43334446-43334650) |
| |
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259-502, gnl|bosTau2|chr20 (5749990-5749746) |
|
259-502, gnl|Hg17|chr16 (4331407-4330283) |
|
259-502, gnl|Mm7|chr10 (43334684-43334911) |
| |
|
529-672, gnl|bosTau2|chr25 (4291310-4291170) |
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529-672, gnl|canFam2|chr6 (40090612-40090391) |
|
529-672, gnl|echTel1|scaffold_104944 (3676-3550) |
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529-672, gnl|hg17|chr16 (4329176-4329423) |
|
529-672, gnl|Hg17|chr16 (4329473-4329330) |
|
529-672, gnl|mm7|chr16 (4287314-4287540) |
|
529-672, gnl|Mm7|chr16 (4287591-4287459) |
|
529-672, gnl|monDom2|scaffold_49 (4486828-4486483) |
|
529-672, gnl|oryCun1|scaffold_151642 (5532-5298) |
|
529-672, gnl|panTro1|chr18 (4202505-4202748) |
|
529-672, gnl|rheMac2|chr20 (4487148-4487395) |
|
529-672, gnl|rn3|chr10 (11080918-11080686) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
15-223, gnl|bosTau2|chr27 (21670788-21670587) |
|
15-223, gnl|Mm7|chr10 (43334446-43334650) |
| |
|
259-502, gnl|bosTau2|chr20 (5749990-5749746) |
|
259-502, gnl|Hg17|chr16 (4331407-4330283) |
|
259-502, gnl|Mm7|chr10 (43334684-43334911) |
| |
|
529-672, gnl|bosTau2|chr25 (4291310-4291170) |
|
529-672, gnl|canFam2|chr6 (40090612-40090391) |
|
529-672, gnl|echTel1|scaffold_104944 (3676-3550) |
|
529-672, gnl|hg17|chr16 (4329176-4329423) |
|
529-672, gnl|Hg17|chr16 (4329473-4329330) |
|
529-672, gnl|mm7|chr16 (4287314-4287540) |
|
529-672, gnl|Mm7|chr16 (4287591-4287459) |
|
529-672, gnl|monDom2|scaffold_49 (4486828-4486483) |
|
529-672, gnl|oryCun1|scaffold_151642 (5532-5298) |
|
529-672, gnl|panTro1|chr18 (4202505-4202748) |
|
529-672, gnl|rheMac2|chr20 (4487148-4487395) |
|
529-672, gnl|rn3|chr10 (11080918-11080686) |
|
cga (0.279096) |
|
che (0.272628) |
|
med (0.232504) |
|
nep (0.183925) |
|
ton (0.1755) |
|
mcp (0.170648) |
|
nje (0.16592) |
|
csp (0.161186) |
|
cag (0.151194) |
|
hyp (0.142837) |
|
hlv (0.139256) |
|
cly (0.120642) |
|
nbm (0.0993246) |
|
eje (0.0988338) |
|
cga (0.279096) |
|
che (0.272628) |
|
med (0.232504) |
|
nep (0.183925) |
|
ton (0.1755) |
|
mcp (0.170648) |
|
nje (0.16592) |
|
csp (0.161186) |
|
cag (0.151194) |
|
hyp (0.142837) |
|
hlv (0.139256) |
|
cly (0.120642) |
|
nbm (0.0993246) |
|
eje (0.0988338) |
