Ss1.1-rnep09c_k22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGACACTGGGACCACCAGTCTTGTCTGTACTGTATGTCGCCAGCATTGCCATACAAACAC GAAGCACAATCAGTCCATCCCAGAGGGACCGAAGTTATGAGAAGCTTTCCAAATATTTTG CTTTATCAGCCGATATCAACATTTGTATCTGGCCTCTCTGTGTCCCAGCGGTGCCTTGTG CAATGTGAATGTGCACGTCTATGCTAAACCACCATTTTATTTGGTTTTTGTTTTGTTTTG GTTTTGCTCAGATACTTGCCAAAATGAGACTCTTCGTCAGCAGCTGCAGGGAGGGTCTGC GGCTGTCTTTCCTTTTGGTTTTGGGATTGCTTTTGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGACACTGGGACCACCAGTCTTGTCTGTACTGTATGTCGCCAGCATTGCCATACAAACAC GAAGCACAATCAGTCCATCCCAGAGGGACCGAAGTTATGAGAAGCTTTCCAAATATTTTG CTTTATCAGCCGATATCAACATTTGTATCTGGCCTCTCTGTGTCCCAGCGGTGCCTTGTG CAATGTGAATGTGCACGTCTATGCTAAACCACCATTTTATTTGGTTTTTGTTTTGTTTTG GTTTTGCTCAGATACTTGCCAAAATGAGACTCTTCGTCAGCAGCTGCAGGGAGGGTCTGC GGCTGTCTTTCCTTTTGGTTTTGGGATTGCTTTTGC |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 156-274, + strand, RNAz p=0.624009 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 156-274, + strand, RNAz p=0.624009 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of NM_004364, + |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 1-336, gnl|bosTau2|chr18 (36586823-36586488) | |
| 1-336, gnl|Hg17|chr19 (38483269-38482937) | |
| 1-336, gnl|Mm7|chr7 (32010979-32011332) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-336, gnl|bosTau2|chr18 (36586823-36586488) | |
| 1-336, gnl|Hg17|chr19 (38483269-38482937) | |
| 1-336, gnl|Mm7|chr7 (32010979-32011332) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| nep (0.183925) | |
| mcp (0.170648) | |
| pty (0.142714) | |
| cly (0.120642) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) | |
| mcp (0.170648) | |
| pty (0.142714) | |
| cly (0.120642) |