Non-Coding RNA Search

Ss1.1-rnep11c_k9.5

Sequence:


               
               AAAAATAAAGTTGCCACCTTGATCCCTTTGTCTGCACTGGCCCTACTGCCACGTACCATT
CCTTTTGTATTCCACTGTGGAAGCTTCTGTTGGAGGTGGAGTGGCTAGAAACAGCCAAGT
TGTCATCTTGGCCTTCAAGTGAGTCCCTTCCTGTCTCCCAGGAGAGGTTCCCATGCATCG
GATGCCGTGGCTGAGGAGCGAGGCTCCTGGAGCTCTGACAGTCTGACCACGGGCCTCTTG
CAGCTTTCAGTCCAGAGAGGCGGCCTGCCAGCCCTCCTCTGTTGAGAAGATGGGCTGAGA
GTCTGGGTAGAAGAATCAGGACACCTGGCCGCCCCTGACTCACTGATGACTTGGACACGA
CCCCTCCCCTGCTGGGGCCCCGGTTTCCCCATCTATGCCATGAGAAAATGGAACTGGATT
TGTTAGTTCCTCGGGGCCGTGACTGGCAGATCTGGTTCCTCTGGTCCTCCATCATTTAAG
CTACCCAGAAAGTTAATATACTTAGCTAATGGCCCCCAAACCACCTCCAGAGACCCGGCC
CTATTGAGGCGGTTTAGCCCGAAGATCGTATTATATTGGTTGAATAAAGTCGAGCTGTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAATAAAGTTGCCACCTTGATCCCTTTGTCTGCACTGGCCCTACTGCCACGTACCATT
CCTTTTGTATTCCACTGTGGAAGCTTCTGTTGGAGGTGGAGTGGCTAGAAACAGCCAAGT
TGTCATCTTGGCCTTCAAGTGAGTCCCTTCCTGTCTCCCAGGAGAGGTTCCCATGCATCG
GATGCCGTGGCTGAGGAGCGAGGCTCCTGGAGCTCTGACAGTCTGACCACGGGCCTCTTG
CAGCTTTCAGTCCAGAGAGGCGGCCTGCCAGCCCTCCTCTGTTGAGAAGATGGGCTGAGA
GTCTGGGTAGAAGAATCAGGACACCTGGCCGCCCCTGACTCACTGATGACTTGGACACGA
CCCCTCCCCTGCTGGGGCCCCGGTTTCCCCATCTATGCCATGAGAAAATGGAACTGGATT
TGTTAGTTCCTCGGGGCCGTGACTGGCAGATCTGGTTCCTCTGGTCCTCCATCATTTAAG
CTACCCAGAAAGTTAATATACTTAGCTAATGGCCCCCAAACCACCTCCAGAGACCCGGCC
CTATTGAGGCGGTTTAGCCCGAAGATCGTATTATATTGGTTGAATAAAGTCGAGCTGTTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               6-447, gnl|bosTau2|chr3 (60374670-60375113)
               

               
               6-447, gnl|Hg17|chr1 (54935253-54934773)
               

               
               6-447, gnl|Mm7|chr4 (106031150-106031540)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-447, gnl|bosTau2|chr3 (60374670-60375113)
               

               
               6-447, gnl|Hg17|chr1 (54935253-54934773)
               

               
               6-447, gnl|Mm7|chr4 (106031150-106031540)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nep (0.183925)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)

	6-447, gnl\|bosTau2\|chr3 (60374670-60375113)
	6-447, gnl\|Hg17\|chr1 (54935253-54934773)
	6-447, gnl\|Mm7\|chr4 (106031150-106031540)