Ss1.1-rnep13c_g15.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCGGCCGAAGGGGGACACTTGGATGAGGCAGCCGTGGCCACCGCCCCACCTCCCCATCAT GAGGTCTGTGGTCAGCAGCTCAGATCTTGCACTGGCAGCAAACGGGGACACAGCAGCTGG ACTGGGAGCAGCAGGGTTGGCAACAGCTGGACTGGCAACAGCTGGGCTTGCAGCAGCCAC AAGAGCCACAGCTGGAGCAGGCACAGGCTGGCACACAGCAGCACACGGGCCTGCAGCAGC TGGACTGGGAGCAGCCACAGGAGCCGCAGCCCCCCTTGGAGCCCCCACAGGAGCCACAGC CCCCCTTGGAGCCCCCACACGAGCCACAGCCCCCTTTGCCACAGCCGGAGCAGACACAGG CTGGCACACAGCAGCACACGGGCCTGCAGCAGCTGGACTGGGAGCAGCCACAGGAGCCGC AGCCCCCCTTAGAGCCCCCACAGGAGCCACAACCCCCTTTGCCACAGCTGGAGCAGGCAC AAGCTGGCACACAGCAGCACACAGGCTTGCAGCAGCTGGACTGGGAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCGGCCGAAGGGGGACACTTGGATGAGGCAGCCGTGGCCACCGCCCCACCTCCCCATCAT GAGGTCTGTGGTCAGCAGCTCAGATCTTGCACTGGCAGCAAACGGGGACACAGCAGCTGG ACTGGGAGCAGCAGGGTTGGCAACAGCTGGACTGGCAACAGCTGGGCTTGCAGCAGCCAC AAGAGCCACAGCTGGAGCAGGCACAGGCTGGCACACAGCAGCACACGGGCCTGCAGCAGC TGGACTGGGAGCAGCCACAGGAGCCGCAGCCCCCCTTGGAGCCCCCACAGGAGCCACAGC CCCCCTTGGAGCCCCCACACGAGCCACAGCCCCCTTTGCCACAGCCGGAGCAGACACAGG CTGGCACACAGCAGCACACGGGCCTGCAGCAGCTGGACTGGGAGCAGCCACAGGAGCCGC AGCCCCCCTTAGAGCCCCCACAGGAGCCACAACCCCCTTTGCCACAGCTGGAGCAGGCAC AAGCTGGCACACAGCAGCACACAGGCTTGCAGCAGCTGGACTGGGAGC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 221-520, - strand, RNAz p=0.999521 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 221-520, - strand, RNAz p=0.999521 |
| Aligned organism(s): 5 entry(ies) | More info |
| Aligned organism(s): 5 entry(ies) | Help | Less info |
| 60-520, gnl|bosTau2|chr26 (26213947-26213466) | |
| 60-520, gnl|Mm7|chr7 (138547330-138547796) | |
| 88-474, gnl|bosTau2|chr26 (26163153-26162764) | |
| 88-474, gnl|Hg17|chr11 (70927188-70926802) | |
| 88-474, gnl|Mm7|chr7 (138629805-138629390) |
| Aligned organism(s): 5 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 60-520, gnl|bosTau2|chr26 (26213947-26213466) | |
| 60-520, gnl|Mm7|chr7 (138547330-138547796) | |
| 88-474, gnl|bosTau2|chr26 (26163153-26162764) | |
| 88-474, gnl|Hg17|chr11 (70927188-70926802) | |
| 88-474, gnl|Mm7|chr7 (138629805-138629390) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.7357) |