Non-Coding RNA Search

Ss1.1-rnep14c_d10.5

Sequence:


               
               GTCTTTCTCTCCAAGAAACCAAAGCAAACCAGATTCCCGATACTATGGCTTGCTCCGAGA
TCCGTTACTGCTGCAGAGTCCCCACTGGCCCCGCCACCACCATCTGCTCCTCTGACAAAT
TCTGCCGGTGTGGAGTCTGCCTGCCCAGCACCTGCCCCCACACTGTTTGGCTACTGGAGC
CAATCTGCTGTGACAACTGCCCCCCACCCTGCCACATCCCTCAGCCCTGTGTGCCCACCT
GCTTCCTGCTCAACTCCTCCCAGCCCACCCCTGGCCTGGAGACCCTCAATCTCACAACCC
ACGTTCAGCCTGGCTGCAGCGAGCCCTGCATCCCAAGATGCTGCTGAGTGATGGCTGACG
CCCTCAGCGCCTGGCAGTAAAGAACGCAGGCTGGGCTGTGTCCTCAGCATTCACTTGCCT
CCAGATTTTATCAGATATTGAGGCAGACCAGTTGGCCTAGATGTGGAAAACCTGCCTCTC
ATCATAATGGAAAGAAAATCAAGACTTTTTAAATGGTTATTTCGCTAAGTAACCATTGGA
TTCATTTGGGCAGAGAACGTCATCTCTAATCAAAACAGTACTGAAATCTACAAGACCTCA
GACTCCACTTTCCTGATCATGTGGCTTCTTGGATCCCATTTCTTGGACCGGGTGTTTTCC
TAGAGGGAAATTAATTTCTTGATGGGTTTTCCAATAAACTTTACTTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCTTTCTCTCCAAGAAACCAAAGCAAACCAGATTCCCGATACTATGGCTTGCTCCGAGA
TCCGTTACTGCTGCAGAGTCCCCACTGGCCCCGCCACCACCATCTGCTCCTCTGACAAAT
TCTGCCGGTGTGGAGTCTGCCTGCCCAGCACCTGCCCCCACACTGTTTGGCTACTGGAGC
CAATCTGCTGTGACAACTGCCCCCCACCCTGCCACATCCCTCAGCCCTGTGTGCCCACCT
GCTTCCTGCTCAACTCCTCCCAGCCCACCCCTGGCCTGGAGACCCTCAATCTCACAACCC
ACGTTCAGCCTGGCTGCAGCGAGCCCTGCATCCCAAGATGCTGCTGAGTGATGGCTGACG
CCCTCAGCGCCTGGCAGTAAAGAACGCAGGCTGGGCTGTGTCCTCAGCATTCACTTGCCT
CCAGATTTTATCAGATATTGAGGCAGACCAGTTGGCCTAGATGTGGAAAACCTGCCTCTC
ATCATAATGGAAAGAAAATCAAGACTTTTTAAATGGTTATTTCGCTAAGTAACCATTGGA
TTCATTTGGGCAGAGAACGTCATCTCTAATCAAAACAGTACTGAAATCTACAAGACCTCA
GACTCCACTTTCCTGATCATGTGGCTTCTTGGATCCCATTTCTTGGACCGGGTGTTTTCC
TAGAGGGAAATTAATTTCTTGATGGGTTTTCCAATAAACTTTACTTGT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               KRA32_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               KRA32_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               21-706, gnl|bosTau2|chr16 (20535895-20536572)
               

               
               21-706, gnl|Hg17|chr17_random (2560798-2561467)
               

               
               21-706, gnl|Mm7|chr11 (99665862-99665186)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               21-706, gnl|bosTau2|chr16 (20535895-20536572)
               

               
               21-706, gnl|Hg17|chr17_random (2560798-2561467)
               

               
               21-706, gnl|Mm7|chr11 (99665862-99665186)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ski (0.733676)
               

               
               nep (0.183925)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ski (0.733676)
               

               
               nep (0.183925)

	21-706, gnl\|bosTau2\|chr16 (20535895-20536572)
	21-706, gnl\|Hg17\|chr17_random (2560798-2561467)
	21-706, gnl\|Mm7\|chr11 (99665862-99665186)