Ss1.1-rnep18c_f9.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCGAGCGGCGGCTGCGGACCAGGATGAGAGCCGGGCCGCCCGGCCGCCCGCAGCGTCTG GAGCCCCGCTGAAGCCGCCGCGGGGACGCCGTGCGGGAGCCGAGATGTGCCAGCGCCTGG GTGGCCTGAGTGCGAGTGACTTCCGGAAGGTGCTGATGAAGACGGGGCTGGTGCTGGTGG TGCTGGGCCACGTGAGCTTCATCGCAGCTGCGCTGCTGCACGGCACCGTGCTGCGCTATG TGACCGCCCCCCACGATGCCGTGGCCCTGCAGTACTGCGTGGTCAACATCCTCTCTGTCA CTTCGGCCATCGTGGTCATCACCTCTGGCATTGCAGCCATCGTGTTGTCACGCTACCTCC CCAGCAGCCCCCTGCGCTGGACAGTGTTTAGCTCGAACGTGGCCTGTGCCCTTCTCTCTC TGACCTGTGCTCTCGGCCTCTTGGCCTCAATCGCTGTGACTTTTGCCACCCAAGGCCGGG CACTCCTAGCTGCCTGCACTTTTGGGAGCCCCGAACTACTGGCACTGGCGCCTGACTGTC CCTTCGACCCCACACGCATTTACAGCTCCAGCCTGTGCCTCTGGGGCATCTCGTTACTGT TCTGCGTGGCAGAGAGTGTGTTTGCGGTGCGCTGCGCCCAGCTCGCCCACCAGCTGCTGG AACTGAGGCCCTGGTTGGGGAAAAGCAGCCACCACA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCGAGCGGCGGCTGCGGACCAGGATGAGAGCCGGGCCGCCCGGCCGCCCGCAGCGTCTG GAGCCCCGCTGAAGCCGCCGCGGGGACGCCGTGCGGGAGCCGAGATGTGCCAGCGCCTGG GTGGCCTGAGTGCGAGTGACTTCCGGAAGGTGCTGATGAAGACGGGGCTGGTGCTGGTGG TGCTGGGCCACGTGAGCTTCATCGCAGCTGCGCTGCTGCACGGCACCGTGCTGCGCTATG TGACCGCCCCCCACGATGCCGTGGCCCTGCAGTACTGCGTGGTCAACATCCTCTCTGTCA CTTCGGCCATCGTGGTCATCACCTCTGGCATTGCAGCCATCGTGTTGTCACGCTACCTCC CCAGCAGCCCCCTGCGCTGGACAGTGTTTAGCTCGAACGTGGCCTGTGCCCTTCTCTCTC TGACCTGTGCTCTCGGCCTCTTGGCCTCAATCGCTGTGACTTTTGCCACCCAAGGCCGGG CACTCCTAGCTGCCTGCACTTTTGGGAGCCCCGAACTACTGGCACTGGCGCCTGACTGTC CCTTCGACCCCACACGCATTTACAGCTCCAGCCTGTGCCTCTGGGGCATCTCGTTACTGT TCTGCGTGGCAGAGAGTGTGTTTGCGGTGCGCTGCGCCCAGCTCGCCCACCAGCTGCTGG AACTGAGGCCCTGGTTGGGGAAAAGCAGCCACCACA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 120-316, gnl|bosTau2|chr2 (74164858-74164662) | |
| 120-316, gnl|canFam2|chr2 (71351760-71351581) | |
| 120-316, gnl|danRer3|chr19 (48253133-48252959) | |
| 120-316, gnl|dasNov1|scaffold_17053 (36919-37098) | |
| 120-316, gnl|echTel1|scaffold_293348 (44533-44351) | |
| 120-316, gnl|fr1|chrUn (20919987-20919811) | |
| 120-316, gnl|hg17|chr1 (33032812-33032991) | |
| 120-316, gnl|Hg17|chr1 (33033014-33032818) | |
| 120-316, gnl|loxAfr1|scaffold_9802 (41037-41218) | |
| 120-316, gnl|mm7|chr4 (128553062-128552882) | |
| 120-316, gnl|Mm7|chr4 (128552857-128553053) | |
| 120-316, gnl|monDom2|scaffold_43 (6799519-6799339) | |
| 120-316, gnl|oryCun1|scaffold_177563 (15733-15912) | |
| 120-316, gnl|panTro1|chr1 (33776737-33776916) | |
| 120-316, gnl|rheMac2|chr1 (35686480-35686659) | |
| 120-316, gnl|rn3|chr5 (148274441-148274261) | |
| 120-316, gnl|tetNig1|chr21 (5468222-5468391) | |
| 374-563, gnl|bosTau2|chr2 (74161612-74161423) | |
| 374-563, gnl|Hg17|chr1 (33030438-33030249) | |
| 374-563, gnl|Mm7|chr4 (128555176-128555365) | |
| 564-696, gnl|bosTau2|chr2 (74161286-74161154) | |
| 564-696, gnl|canFam2|chr2 (71354469-71354176) | |
| 564-696, gnl|dasNov1|scaffold_17053 (34163-34377) | |
| 564-696, gnl|echTel1|scaffold_293348 (47189-46927) | |
| 564-696, gnl|hg17|chr1 (33029874-33030160) | |
| 564-696, gnl|Hg17|chr1 (33030133-33030001) | |
| 564-696, gnl|loxAfr1|scaffold_159915 (3825-4051) | |
| 564-696, gnl|mm7|chr4 (128555699-128555434) | |
| 564-696, gnl|Mm7|chr4 (128555460-128555592) | |
| 564-696, gnl|monDom2|scaffold_43 (6802850-6802568) | |
| 564-696, gnl|oryCun1|scaffold_177563 (12880-13126) | |
| 564-696, gnl|panTro1|chr1 (33773800-33774086) | |
| 564-696, gnl|rn3|chr5 (148277359-148277099) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 120-316, gnl|bosTau2|chr2 (74164858-74164662) | |
| 120-316, gnl|canFam2|chr2 (71351760-71351581) | |
| 120-316, gnl|danRer3|chr19 (48253133-48252959) | |
| 120-316, gnl|dasNov1|scaffold_17053 (36919-37098) | |
| 120-316, gnl|echTel1|scaffold_293348 (44533-44351) | |
| 120-316, gnl|fr1|chrUn (20919987-20919811) | |
| 120-316, gnl|hg17|chr1 (33032812-33032991) | |
| 120-316, gnl|Hg17|chr1 (33033014-33032818) | |
| 120-316, gnl|loxAfr1|scaffold_9802 (41037-41218) | |
| 120-316, gnl|mm7|chr4 (128553062-128552882) | |
| 120-316, gnl|Mm7|chr4 (128552857-128553053) | |
| 120-316, gnl|monDom2|scaffold_43 (6799519-6799339) | |
| 120-316, gnl|oryCun1|scaffold_177563 (15733-15912) | |
| 120-316, gnl|panTro1|chr1 (33776737-33776916) | |
| 120-316, gnl|rheMac2|chr1 (35686480-35686659) | |
| 120-316, gnl|rn3|chr5 (148274441-148274261) | |
| 120-316, gnl|tetNig1|chr21 (5468222-5468391) | |
| 374-563, gnl|bosTau2|chr2 (74161612-74161423) | |
| 374-563, gnl|Hg17|chr1 (33030438-33030249) | |
| 374-563, gnl|Mm7|chr4 (128555176-128555365) | |
| 564-696, gnl|bosTau2|chr2 (74161286-74161154) | |
| 564-696, gnl|canFam2|chr2 (71354469-71354176) | |
| 564-696, gnl|dasNov1|scaffold_17053 (34163-34377) | |
| 564-696, gnl|echTel1|scaffold_293348 (47189-46927) | |
| 564-696, gnl|hg17|chr1 (33029874-33030160) | |
| 564-696, gnl|Hg17|chr1 (33030133-33030001) | |
| 564-696, gnl|loxAfr1|scaffold_159915 (3825-4051) | |
| 564-696, gnl|mm7|chr4 (128555699-128555434) | |
| 564-696, gnl|Mm7|chr4 (128555460-128555592) | |
| 564-696, gnl|monDom2|scaffold_43 (6802850-6802568) | |
| 564-696, gnl|oryCun1|scaffold_177563 (12880-13126) | |
| 564-696, gnl|panTro1|chr1 (33773800-33774086) | |
| 564-696, gnl|rn3|chr5 (148277359-148277099) |
| Expressed library(ies): 8 entry(ies) | More info |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
| col (0.585023) | |
| ill (0.526778) | |
| nco (0.485201) | |
| nlu (0.191681) | |
| nep (0.183925) | |
| pty (0.142714) | |
| cov (0.132153) | |
| jej (0.0989218) |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| col (0.585023) | |
| ill (0.526778) | |
| nco (0.485201) | |
| nlu (0.191681) | |
| nep (0.183925) | |
| pty (0.142714) | |
| cov (0.132153) | |
| jej (0.0989218) |