Non-Coding RNA Search

Ss1.1-rnep19c_g19.5

Sequence:


               
               CTGCAGAATACATGGCCCCCGAGGTGGTGGAGGTCTTCACGGACGAGGCCACCTTTTACG
ACAAGCGCTGTGACCTGTGGAGCCTGGGCGTGGTCCTCTACATCATGCTGAGCGGCTACC
CGCCCTTCGTGGGTCACTGCGGGGCCGACTGCGGCTGGGACCGGGGAGAGGTCTGCCCGG
TGTGCCAGAACAAGCTGTTTGAGAGCATCCAGGAAGGCAAGTATGAGTTTCCGGACAAGG
ACTGGGCACACATCTCCAGCGAGGCCAAAGACCTCATCTCCAAGCTCCTGGTTCGAGACG
CAAAGCAGAGACTGAGCGCTGCCCAAGTCCTGCAGCACCCGTGGGTTCAAGGGCAAGCTC
CAGAAAGGGGACTCCCCACGCCGCAAGTCCTCCAGAGAAATAGCAGCACAATGGACCTGA
CACTCTTCGCAGCCGAGGCCATCGCCCTGAACCGCCAGCTGTCTCAGCACGAGGAGAATG
AACTGGCAAAGGAGTCGGAGGCGCTGGCCGAGGGCCTCTGCTCTGTGAAGCTTTCCCCTC
CCTCCAAGTCACGCCTGGCCCGCCGGAGGGCACTGGCCCAGGCAGGCCGCAGTGGAGACA
CACAGTCATGCCCAACAACACCCACAGGGCTCTGACCTGCTCCCGGCCCCAGGCCTTGCC
CCCTGGAAACCTGTGAGGGGCTTGCTCCGCGGCTCCGTCTAGGCCTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCAGAATACATGGCCCCCGAGGTGGTGGAGGTCTTCACGGACGAGGCCACCTTTTACG
ACAAGCGCTGTGACCTGTGGAGCCTGGGCGTGGTCCTCTACATCATGCTGAGCGGCTACC
CGCCCTTCGTGGGTCACTGCGGGGCCGACTGCGGCTGGGACCGGGGAGAGGTCTGCCCGG
TGTGCCAGAACAAGCTGTTTGAGAGCATCCAGGAAGGCAAGTATGAGTTTCCGGACAAGG
ACTGGGCACACATCTCCAGCGAGGCCAAAGACCTCATCTCCAAGCTCCTGGTTCGAGACG
CAAAGCAGAGACTGAGCGCTGCCCAAGTCCTGCAGCACCCGTGGGTTCAAGGGCAAGCTC
CAGAAAGGGGACTCCCCACGCCGCAAGTCCTCCAGAGAAATAGCAGCACAATGGACCTGA
CACTCTTCGCAGCCGAGGCCATCGCCCTGAACCGCCAGCTGTCTCAGCACGAGGAGAATG
AACTGGCAAAGGAGTCGGAGGCGCTGGCCGAGGGCCTCTGCTCTGTGAAGCTTTCCCCTC
CCTCCAAGTCACGCCTGGCCCGCCGGAGGGCACTGGCCCAGGCAGGCCGCAGTGGAGACA
CACAGTCATGCCCAACAACACCCACAGGGCTCTGACCTGCTCCCGGCCCCAGGCCTTGCC
CCCTGGAAACCTGTGAGGGGCTTGCTCCGCGGCTCCGTCTAGGCCTCT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|61825035|ref|XP_604000.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|61825035|ref|XP_604000.1|

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               185-353, gnl|bosTau2|chr7 (18277404-18277572)
               

               
               185-353, gnl|Hg17|chr19 (1992207-1992039)
               

               
               185-353, gnl|Mm7|chr10 (80457842-80457674)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               185-353, gnl|bosTau2|chr7 (18277404-18277572)
               

               
               185-353, gnl|Hg17|chr19 (1992207-1992039)
               

               
               185-353, gnl|Mm7|chr10 (80457842-80457674)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               nep (0.183925)
               

               
               pla (0.133672)
               

               
               eep (0.122564)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)
               

               
               pla (0.133672)
               

               
               eep (0.122564)

	185-353, gnl\|bosTau2\|chr7 (18277404-18277572)
	185-353, gnl\|Hg17\|chr19 (1992207-1992039)
	185-353, gnl\|Mm7\|chr10 (80457842-80457674)