Ss1.1-rnep21cc_c5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCCTCCAGGCTCCAGGAGCAGCGTCAAGGCCAGGCCACAATGGTCTCAGTGACAATGGCC ACTTCCGAGTGGATCCAGTTCTTTAAGGAAGCCGGCATTCCTCCAGGACCTGCTGTCAAT TATGCCGTGATGTTTGTGGATAATAGGATCCAGAAGAGCATGCTGCTGGACCTCAACAAG GAGATCATGAATGAGCTGGGCGTGACCGTGGTGGGTGACATCATCGCCATCCTCAAGCAT GCTAAGGTGGTGCACCGCCAGGACATGTGCAAAGCTGCCACTGAGTCGGTGCCCTGTGGC CCCAGTCCCCTCCCAGGCGAGACTCGCCGAGGCACCTCTAGCGCTGCCTCCCGAATGATC ACCAACAGCCTGAACCGTGACTCCCCACCCGGCACTCCCCCCAGGCGGCCAGACACCAGC ACCTCCAAGATCTCTGTCACTGTGCCCAATAAGATGGCAGCAAAGAGCGCCAAGGCCGCT GCAGCCCTGGCCCGCTGCGAAGAGGAGAGCCTGGCCGTGCCCACCAAGCGGCGCCGGGTC ACTGCCGAGATG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCCTCCAGGCTCCAGGAGCAGCGTCAAGGCCAGGCCACAATGGTCTCAGTGACAATGGCC ACTTCCGAGTGGATCCAGTTCTTTAAGGAAGCCGGCATTCCTCCAGGACCTGCTGTCAAT TATGCCGTGATGTTTGTGGATAATAGGATCCAGAAGAGCATGCTGCTGGACCTCAACAAG GAGATCATGAATGAGCTGGGCGTGACCGTGGTGGGTGACATCATCGCCATCCTCAAGCAT GCTAAGGTGGTGCACCGCCAGGACATGTGCAAAGCTGCCACTGAGTCGGTGCCCTGTGGC CCCAGTCCCCTCCCAGGCGAGACTCGCCGAGGCACCTCTAGCGCTGCCTCCCGAATGATC ACCAACAGCCTGAACCGTGACTCCCCACCCGGCACTCCCCCCAGGCGGCCAGACACCAGC ACCTCCAAGATCTCTGTCACTGTGCCCAATAAGATGGCAGCAAAGAGCGCCAAGGCCGCT GCAGCCCTGGCCCGCTGCGAAGAGGAGAGCCTGGCCGTGCCCACCAAGCGGCGCCGGGTC ACTGCCGAGATG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 9-341, gnl|bosTau2|chr2 (1487614-1487280) | |
| 9-341, gnl|Hg17|chr19 (45534160-45531597) | |
| 9-341, gnl|Mm7|chr7 (24483785-24485026) | |
| 145-262, gnl|bosTau2|chr18 (41408217-41408100) | |
| 145-262, gnl|canFam2|chr1 (116240244-116240091) | |
| 145-262, gnl|danRer3|chr18 (38850313-38850181) | |
| 145-262, gnl|dasNov1|scaffold_9481 (83777-83915) | |
| 145-262, gnl|echTel1|scaffold_241634 (2675-2520) | |
| 145-262, gnl|fr1|chrUn (170638022-170637900) | |
| 145-262, gnl|hg17|chr19 (45533827-45533980) | |
| 145-262, gnl|Hg17|chr19 (45533973-45533856) | |
| 145-262, gnl|mm7|chr7 (24484103-24483953) | |
| 145-262, gnl|Mm7|chr7 (24483958-24484075) | |
| 145-262, gnl|monDom2|scaffold_149 (87265-87415) | |
| 145-262, gnl|oryCun1|scaffold_179081 (300-449) | |
| 145-262, gnl|panTro1|chr20 (42470414-42470567) | |
| 145-262, gnl|rheMac2|chr19 (46692630-46692783) | |
| 145-262, gnl|rn3|chr1 (82722845-82722692) | |
| 145-262, gnl|tetNig1|chr16 (1746135-1746284) | |
| 343-481, gnl|bosTau2|chr18 (41403335-41403197) | |
| 343-481, gnl|canFam2|chr1 (116246011-116245845) | |
| 343-481, gnl|danRer3|chr18 (38852902-38852766) | |
| 343-481, gnl|dasNov1|scaffold_9481 (79014-79180) | |
| 343-481, gnl|echTel1|scaffold_283608 (39683-39829) | |
| 343-481, gnl|fr1|chrUn (170638598-170638447) | |
| 343-481, gnl|hg17|chr19 (45526155-45526319) | |
| 343-481, gnl|Hg17|chr19 (45526298-45526160) | |
| 343-481, gnl|loxAfr1|scaffold_38547 (4997-5161) | |
| 343-481, gnl|mm7|chr7 (24491011-24490846) | |
| 343-481, gnl|Mm7|chr7 (24490866-24491004) | |
| 343-481, gnl|monDom2|scaffold_149 (85868-86021) | |
| 343-481, gnl|panTro1|chr20 (42462780-42462944) | |
| 343-481, gnl|rheMac2|chr19 (46683599-46683763) | |
| 343-481, gnl|rn3|chr1 (82728567-82728398) | |
| 343-481, gnl|tetNig1|chr16 (1745696-1745844) | |
| 343-481, gnl|xenTro1|scaffold_886 (133607-133755) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 9-341, gnl|bosTau2|chr2 (1487614-1487280) | |
| 9-341, gnl|Hg17|chr19 (45534160-45531597) | |
| 9-341, gnl|Mm7|chr7 (24483785-24485026) | |
| 145-262, gnl|bosTau2|chr18 (41408217-41408100) | |
| 145-262, gnl|canFam2|chr1 (116240244-116240091) | |
| 145-262, gnl|danRer3|chr18 (38850313-38850181) | |
| 145-262, gnl|dasNov1|scaffold_9481 (83777-83915) | |
| 145-262, gnl|echTel1|scaffold_241634 (2675-2520) | |
| 145-262, gnl|fr1|chrUn (170638022-170637900) | |
| 145-262, gnl|hg17|chr19 (45533827-45533980) | |
| 145-262, gnl|Hg17|chr19 (45533973-45533856) | |
| 145-262, gnl|mm7|chr7 (24484103-24483953) | |
| 145-262, gnl|Mm7|chr7 (24483958-24484075) | |
| 145-262, gnl|monDom2|scaffold_149 (87265-87415) | |
| 145-262, gnl|oryCun1|scaffold_179081 (300-449) | |
| 145-262, gnl|panTro1|chr20 (42470414-42470567) | |
| 145-262, gnl|rheMac2|chr19 (46692630-46692783) | |
| 145-262, gnl|rn3|chr1 (82722845-82722692) | |
| 145-262, gnl|tetNig1|chr16 (1746135-1746284) | |
| 343-481, gnl|bosTau2|chr18 (41403335-41403197) | |
| 343-481, gnl|canFam2|chr1 (116246011-116245845) | |
| 343-481, gnl|danRer3|chr18 (38852902-38852766) | |
| 343-481, gnl|dasNov1|scaffold_9481 (79014-79180) | |
| 343-481, gnl|echTel1|scaffold_283608 (39683-39829) | |
| 343-481, gnl|fr1|chrUn (170638598-170638447) | |
| 343-481, gnl|hg17|chr19 (45526155-45526319) | |
| 343-481, gnl|Hg17|chr19 (45526298-45526160) | |
| 343-481, gnl|loxAfr1|scaffold_38547 (4997-5161) | |
| 343-481, gnl|mm7|chr7 (24491011-24490846) | |
| 343-481, gnl|Mm7|chr7 (24490866-24491004) | |
| 343-481, gnl|monDom2|scaffold_149 (85868-86021) | |
| 343-481, gnl|panTro1|chr20 (42462780-42462944) | |
| 343-481, gnl|rheMac2|chr19 (46683599-46683763) | |
| 343-481, gnl|rn3|chr1 (82728567-82728398) | |
| 343-481, gnl|tetNig1|chr16 (1745696-1745844) | |
| 343-481, gnl|xenTro1|scaffold_886 (133607-133755) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) | |
| ton (0.1755) |