Ss1.1-rnep21cc_m11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCCGCCGCCCGCCGCCGCCGCTCAGACCCCTACGTCAAAAGCTACCTCCTCCCGGATAA GCAGAGCAAGCGCAAGACAACAGTGAAGAAACGGAATCTGAACCCGATCTTCAACGAGAC TCTCCGGTACTCTGTCCCGCAGGCTGAGCTCCAGGGCCGTGTGTTGAGCCTATCCGTGTG GCACCGCGAAAGCCTGGGTCGCAACATCTTTCTGGGCGAAGTAGAAGTGCCCCTGGACAC GTGGAACTGGGACTCCGAGCCCACCTGGCTCCCCCTGCAGCCCAGGGTCCCGCCGTCTCC CGATGCCCTTCCCAGCCGCGGGCTGCTCTCTCTGTCCCTCAAGTACATCCCCGCCGGCTC CGAGGGTGCAGGACTGCCTCCGAGCGGGGAGCTGCACTTCTGGGTGAAGGAGGCTCAGGA CCTTGTGCCTCTGCGCTCAGGATCTCTGGATACTTACATACAATGCTCTGTGCTGCCTGA TGACAGCCGGGCCAGCCGCCAGCGGACGAGGGTGGTGCGTCGCAGCCTCAACCCCATGTT CAATCACACCATGGTTTATGATGGCTTCGAGCCTGCTGACCTGCGCCAGGCCTGTGCCGA GCTCTCCCTGTGGGACCATGGGACCCTGGCCAGTCGCCAACTGGGGGGCACACGCCTCAG CCTGGGCACCGGCAGCAGCTACGGGCTCCAGGTGCCCTGGATGGACTGCACGCCTGAGGA GAAGCAGCTGTGGCAGACGCTCCTGGAGCGGCCATGCGAGTGGGTGGACGGCCTTCTGCC CCTCAGAACTAACCTGGCCCCCAGGACTTAGCTGCCCTACAAGCCCTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCCGCCGCCCGCCGCCGCCGCTCAGACCCCTACGTCAAAAGCTACCTCCTCCCGGATAA GCAGAGCAAGCGCAAGACAACAGTGAAGAAACGGAATCTGAACCCGATCTTCAACGAGAC TCTCCGGTACTCTGTCCCGCAGGCTGAGCTCCAGGGCCGTGTGTTGAGCCTATCCGTGTG GCACCGCGAAAGCCTGGGTCGCAACATCTTTCTGGGCGAAGTAGAAGTGCCCCTGGACAC GTGGAACTGGGACTCCGAGCCCACCTGGCTCCCCCTGCAGCCCAGGGTCCCGCCGTCTCC CGATGCCCTTCCCAGCCGCGGGCTGCTCTCTCTGTCCCTCAAGTACATCCCCGCCGGCTC CGAGGGTGCAGGACTGCCTCCGAGCGGGGAGCTGCACTTCTGGGTGAAGGAGGCTCAGGA CCTTGTGCCTCTGCGCTCAGGATCTCTGGATACTTACATACAATGCTCTGTGCTGCCTGA TGACAGCCGGGCCAGCCGCCAGCGGACGAGGGTGGTGCGTCGCAGCCTCAACCCCATGTT CAATCACACCATGGTTTATGATGGCTTCGAGCCTGCTGACCTGCGCCAGGCCTGTGCCGA GCTCTCCCTGTGGGACCATGGGACCCTGGCCAGTCGCCAACTGGGGGGCACACGCCTCAG CCTGGGCACCGGCAGCAGCTACGGGCTCCAGGTGCCCTGGATGGACTGCACGCCTGAGGA GAAGCAGCTGTGGCAGACGCTCCTGGAGCGGCCATGCGAGTGGGTGGACGGCCTTCTGCC CCTCAGAACTAACCTGGCCCCCAGGACTTAGCTGCCCTACAAGCCCTA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 121-288, gnl|bosTau2|chr2 (78047750-78047583) | |
| 121-288, gnl|canFam2|chr2 (75808417-75808242) | |
| 121-288, gnl|danRer3|chr19 (68938596-68938426) | |
| 121-288, gnl|dasNov1|scaffold_11829 (7179-7354) | |
| 121-288, gnl|echTel1|scaffold_319044 (48744-48569) | |
| 121-288, gnl|fr1|chrUn (138997310-138997484) | |
| 121-288, gnl|hg17|chr1 (27361417-27361592) | |
| 121-288, gnl|Hg17|chr1 (27361420-27361587) | |
| 121-288, gnl|loxAfr1|scaffold_1480 (70917-71092) | |
| 121-288, gnl|mm7|chr4 (132634645-132634461) | |
| 121-288, gnl|Mm7|chr4 (132634640-132634473) | |
| 121-288, gnl|monDom2|scaffold_91 (5110060-5110235) | |
| 121-288, gnl|oryCun1|scaffold_195589 (4943-5117) | |
| 121-288, gnl|panTro1|chr1 (28038971-28039146) | |
| 121-288, gnl|rheMac2|chr1 (30024798-30024973) | |
| 121-288, gnl|rn3|chr5 (151880238-151880422) | |
| 121-288, gnl|tetNig1|chr21 (1082280-1082106) | |
| 465-672, gnl|bosTau2|chr2 (78046298-78046091) | |
| 465-672, gnl|Hg17|chr1 (27363915-27364122) | |
| 465-672, gnl|Mm7|chr4 (132632094-132631887) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 121-288, gnl|bosTau2|chr2 (78047750-78047583) | |
| 121-288, gnl|canFam2|chr2 (75808417-75808242) | |
| 121-288, gnl|danRer3|chr19 (68938596-68938426) | |
| 121-288, gnl|dasNov1|scaffold_11829 (7179-7354) | |
| 121-288, gnl|echTel1|scaffold_319044 (48744-48569) | |
| 121-288, gnl|fr1|chrUn (138997310-138997484) | |
| 121-288, gnl|hg17|chr1 (27361417-27361592) | |
| 121-288, gnl|Hg17|chr1 (27361420-27361587) | |
| 121-288, gnl|loxAfr1|scaffold_1480 (70917-71092) | |
| 121-288, gnl|mm7|chr4 (132634645-132634461) | |
| 121-288, gnl|Mm7|chr4 (132634640-132634473) | |
| 121-288, gnl|monDom2|scaffold_91 (5110060-5110235) | |
| 121-288, gnl|oryCun1|scaffold_195589 (4943-5117) | |
| 121-288, gnl|panTro1|chr1 (28038971-28039146) | |
| 121-288, gnl|rheMac2|chr1 (30024798-30024973) | |
| 121-288, gnl|rn3|chr5 (151880238-151880422) | |
| 121-288, gnl|tetNig1|chr21 (1082280-1082106) | |
| 465-672, gnl|bosTau2|chr2 (78046298-78046091) | |
| 465-672, gnl|Hg17|chr1 (27363915-27364122) | |
| 465-672, gnl|Mm7|chr4 (132632094-132631887) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| nep (0.183925) | |
| ton (0.1755) | |
| cut (0.169924) | |
| pty (0.142714) | |
| pla (0.133672) | |
| ute (0.132784) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) | |
| ton (0.1755) | |
| cut (0.169924) | |
| pty (0.142714) | |
| pla (0.133672) | |
| ute (0.132784) |