Non-Coding RNA Search

Ss1.1-rnep23c_e20.5

Sequence:


               
               ACTGGGAGCTCGCTTTTTCCAACGGCCGGAAGTTTCGGCTCGTCCGCTCTGTTCGGGTAG
TGGGCTCCGCGGCGCCGGGCGCAGGAGAGGGGCCGCTGTGGAAAGCCTGGCCCCAGCCGA
GTCAGCGCGCACTTCTGCTGCCAAGAAACAGCAGTTGGTTGGTCCTGGGCGTCAAGCGCC
CCCGTCCGTCAGGTCCTCCAGCCTGAGGACAGGGATGGAGAGGCGTGCAGGCTCCTGCCT
TTGCAGCTGTCTGGCTGTGCTTGCCCTGCTGCCCGCCCTGAGCTTGGCGCAGTACGAGAG
CTGGCCCCACTACCCGGAGTACTTCCAGCAGCCCGCCCCCGAGTACCACCGGCCTCAGGC
GCCGTCCGACGTGGTCAAGATCCAGCTGCGCCTGGCGGGCCAGAAGAGGAAGCACAGCGA
GGGCCGGCTGGAGGTGTACTACAATGGCCAGTGGGGCACCGTGTGCGACGACGACTTCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTGGGAGCTCGCTTTTTCCAACGGCCGGAAGTTTCGGCTCGTCCGCTCTGTTCGGGTAG
TGGGCTCCGCGGCGCCGGGCGCAGGAGAGGGGCCGCTGTGGAAAGCCTGGCCCCAGCCGA
GTCAGCGCGCACTTCTGCTGCCAAGAAACAGCAGTTGGTTGGTCCTGGGCGTCAAGCGCC
CCCGTCCGTCAGGTCCTCCAGCCTGAGGACAGGGATGGAGAGGCGTGCAGGCTCCTGCCT
TTGCAGCTGTCTGGCTGTGCTTGCCCTGCTGCCCGCCCTGAGCTTGGCGCAGTACGAGAG
CTGGCCCCACTACCCGGAGTACTTCCAGCAGCCCGCCCCCGAGTACCACCGGCCTCAGGC
GCCGTCCGACGTGGTCAAGATCCAGCTGCGCCTGGCGGGCCAGAAGAGGAAGCACAGCGA
GGGCCGGCTGGAGGTGTACTACAATGGCCAGTGGGGCACCGTGTGCGACGACGACTTCTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61816684|ref|XP_610220.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61816684|ref|XP_610220.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               138-478, gnl|bosTau2|chr8 (37572264-37572604)
               

               
               138-478, gnl|Hg17|chr8 (23281899-23281546)
               

               
               138-478, gnl|Mm7|chr14 (64278187-64278493)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               138-478, gnl|bosTau2|chr8 (37572264-37572604)
               

               
               138-478, gnl|Hg17|chr8 (23281899-23281546)
               

               
               138-478, gnl|Mm7|chr14 (64278187-64278493)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nep (0.183925)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)

	138-478, gnl\|bosTau2\|chr8 (37572264-37572604)
	138-478, gnl\|Hg17\|chr8 (23281899-23281546)
	138-478, gnl\|Mm7\|chr14 (64278187-64278493)