Ss1.1-rnep23c_m8.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCTTCACAAGCCTCATCCCGAAATCCTGGAACCTCTAGGTCTTGGCCAGTTAACTAGCA GCGGGCTCTGCAGTGGACCTCGAGGTTTGCTGAGAGCCGTGTTCTTGCGGCGGAGGCAGA AGCGAGACGTCTCCGGACGCCCTCCCACGCGGCGGGACCCCGCAATACCCGGGTCTGGCC TGGACCTCGCCAGGGGAAGGCATCTGTGTCCTTCAAGGATGTGACTGTGGAGTTTACCCA GGAGGAGTGGCGGCAGATGAGCCCTGCTCGGAGGACCCTGTACAGAGATGTGATGCTGGA GAACTACAGCCACCTTGTGTCTTCGGGGCTGCACCTGCAGCATGCAGAAGTTCCCAAGCT AAGGGTCAAATCGGAACTACAGCTGCCAGCCTACATCACAGCCACAGCAACTCAGGATTC AAGTCGCATCTGGGCCCAACACCACAGCTCACGCCAACACCAGATCCTTAACCCACTGAG TGGGACCAGGGATTGAACTCGAATCCTTACGGATAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCTTCACAAGCCTCATCCCGAAATCCTGGAACCTCTAGGTCTTGGCCAGTTAACTAGCA GCGGGCTCTGCAGTGGACCTCGAGGTTTGCTGAGAGCCGTGTTCTTGCGGCGGAGGCAGA AGCGAGACGTCTCCGGACGCCCTCCCACGCGGCGGGACCCCGCAATACCCGGGTCTGGCC TGGACCTCGCCAGGGGAAGGCATCTGTGTCCTTCAAGGATGTGACTGTGGAGTTTACCCA GGAGGAGTGGCGGCAGATGAGCCCTGCTCGGAGGACCCTGTACAGAGATGTGATGCTGGA GAACTACAGCCACCTTGTGTCTTCGGGGCTGCACCTGCAGCATGCAGAAGTTCCCAAGCT AAGGGTCAAATCGGAACTACAGCTGCCAGCCTACATCACAGCCACAGCAACTCAGGATTC AAGTCGCATCTGGGCCCAACACCACAGCTCACGCCAACACCAGATCCTTAACCCACTGAG TGGGACCAGGGATTGAACTCGAATCCTTACGGATAC |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 198-321, gnl|bosTau2|chr8 (45148253-45148376) | |
| 198-321, gnl|canFam2|chr1 (72727184-72727054) | |
| 198-321, gnl|canFam2|chr1 (72727184-72727054) | |
| 198-321, gnl|canFam2|chr1 (73113975-73113838) | |
| 198-321, gnl|dasNov1|scaffold_22358 (9065-9192) | |
| 198-321, gnl|dasNov1|scaffold_40272 (3241-3104) | |
| 198-321, gnl|dasNov1|scaffold_64869 (8077-8207) | |
| 198-321, gnl|echTel1|scaffold_279322 (6008-6138) | |
| 198-321, gnl|echTel1|scaffold_279322 (6008-6138) | |
| 198-321, gnl|echTel1|scaffold_279322 (6000-6137) | |
| 198-321, gnl|galGal2|chrUn (140707059-140706922) | |
| 198-321, gnl|hg17|chr15 (19078399-19078527) | |
| 198-321, gnl|hg17|chr15 (21037210-21037338) | |
| 198-321, gnl|hg17|chr9 (96686723-96686860) | |
| 198-321, gnl|Hg17|chr9 (96686855-96686732) | |
| 198-321, gnl|loxAfr1|scaffold_1187 (56141-56004) | |
| 198-321, gnl|loxAfr1|scaffold_6605 (36960-37090) | |
| 198-321, gnl|loxAfr1|scaffold_6605 (36960-37090) | |
| 198-321, gnl|mm7|chr13 (63161226-63161098) | |
| 198-321, gnl|mm7|chr13 (63161226-63161098) | |
| 198-321, gnl|Mm7|chr5 (137557692-137557569) | |
| 198-321, gnl|mm7|chr7 (37886127-37886008) | |
| 198-321, gnl|monDom2|scaffold_160 (842430-842293) | |
| 198-321, gnl|oryCun1|scaffold_151287 (6360-6232) | |
| 198-321, gnl|oryCun1|scaffold_151287 (6360-6232) | |
| 198-321, gnl|oryCun1|scaffold_162945 (12667-12434) | |
| 198-321, gnl|panTro1|chrUn_random (29907385-29907248) | |
| 198-321, gnl|rheMac2|chr15 (103997962-103997836) | |
| 198-321, gnl|rheMac2|chr15 (103997962-103997836) | |
| 198-321, gnl|rheMac2|chr15 (108574854-108574991) | |
| 198-321, gnl|rn3|chr1 (84864869-84864741) | |
| 198-321, gnl|rn3|chr1 (84864869-84864741) | |
| 198-321, gnl|rn3|chr1 (84864879-84864742) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 198-321, gnl|bosTau2|chr8 (45148253-45148376) | |
| 198-321, gnl|canFam2|chr1 (72727184-72727054) | |
| 198-321, gnl|canFam2|chr1 (72727184-72727054) | |
| 198-321, gnl|canFam2|chr1 (73113975-73113838) | |
| 198-321, gnl|dasNov1|scaffold_22358 (9065-9192) | |
| 198-321, gnl|dasNov1|scaffold_40272 (3241-3104) | |
| 198-321, gnl|dasNov1|scaffold_64869 (8077-8207) | |
| 198-321, gnl|echTel1|scaffold_279322 (6008-6138) | |
| 198-321, gnl|echTel1|scaffold_279322 (6008-6138) | |
| 198-321, gnl|echTel1|scaffold_279322 (6000-6137) | |
| 198-321, gnl|galGal2|chrUn (140707059-140706922) | |
| 198-321, gnl|hg17|chr15 (19078399-19078527) | |
| 198-321, gnl|hg17|chr15 (21037210-21037338) | |
| 198-321, gnl|hg17|chr9 (96686723-96686860) | |
| 198-321, gnl|Hg17|chr9 (96686855-96686732) | |
| 198-321, gnl|loxAfr1|scaffold_1187 (56141-56004) | |
| 198-321, gnl|loxAfr1|scaffold_6605 (36960-37090) | |
| 198-321, gnl|loxAfr1|scaffold_6605 (36960-37090) | |
| 198-321, gnl|mm7|chr13 (63161226-63161098) | |
| 198-321, gnl|mm7|chr13 (63161226-63161098) | |
| 198-321, gnl|Mm7|chr5 (137557692-137557569) | |
| 198-321, gnl|mm7|chr7 (37886127-37886008) | |
| 198-321, gnl|monDom2|scaffold_160 (842430-842293) | |
| 198-321, gnl|oryCun1|scaffold_151287 (6360-6232) | |
| 198-321, gnl|oryCun1|scaffold_151287 (6360-6232) | |
| 198-321, gnl|oryCun1|scaffold_162945 (12667-12434) | |
| 198-321, gnl|panTro1|chrUn_random (29907385-29907248) | |
| 198-321, gnl|rheMac2|chr15 (103997962-103997836) | |
| 198-321, gnl|rheMac2|chr15 (103997962-103997836) | |
| 198-321, gnl|rheMac2|chr15 (108574854-108574991) | |
| 198-321, gnl|rn3|chr1 (84864869-84864741) | |
| 198-321, gnl|rn3|chr1 (84864869-84864741) | |
| 198-321, gnl|rn3|chr1 (84864879-84864742) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) |