Non-Coding RNA Search

Ss1.1-rnep23c_n12.5

Sequence:


               
               CGGTGTCTGTGCAGTCCCCGTGCTGCCGCCCGCCCTGCTGCCAGCCCGCCCCCTGCCGCA
CTGTCTGCAGGACCTTCCCCTCTTGCTGCTGAGCCACGCACAGACTGCCAGGAGCAAACA
ACTAACCTTCTGAAAAAGTTCTACTCTCATTTCTCTATCTGACAAACTTCCTGCCCTGAA
CCATCAAGACCCCAAATCAACCAGGAGTTGAAAAGGATCCAGATTCATCCATTAAGCCTT
GGGCTGTTCTCAAGTAACAGCAACAACTTCCTTCTTCCCCTCTGAGATCTTAAGTCTTGC
AGCATGATCGTTTTCTAATAAACTTCTCTTTTTTTGGCCTGGCAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGTGTCTGTGCAGTCCCCGTGCTGCCGCCCGCCCTGCTGCCAGCCCGCCCCCTGCCGCA
CTGTCTGCAGGACCTTCCCCTCTTGCTGCTGAGCCACGCACAGACTGCCAGGAGCAAACA
ACTAACCTTCTGAAAAAGTTCTACTCTCATTTCTCTATCTGACAAACTTCCTGCCCTGAA
CCATCAAGACCCCAAATCAACCAGGAGTTGAAAAGGATCCAGATTCATCCATTAAGCCTT
GGGCTGTTCTCAAGTAACAGCAACAACTTCCTTCTTCCCCTCTGAGATCTTAAGTCTTGC
AGCATGATCGTTTTCTAATAAACTTCTCTTTTTTTGGCCTGGCAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               6-346, gnl|bosTau2|chr19 (33627787-33628111)
               

               
               6-346, gnl|Hg17|chr17 (36456739-36456321)
               

               
               6-346, gnl|Mm7|chr11 (99712003-99711683)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-346, gnl|bosTau2|chr19 (33627787-33628111)
               

               
               6-346, gnl|Hg17|chr17 (36456739-36456321)
               

               
               6-346, gnl|Mm7|chr11 (99712003-99711683)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nep (0.36785)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.36785)

	6-346, gnl\|bosTau2\|chr19 (33627787-33628111)
	6-346, gnl\|Hg17\|chr17 (36456739-36456321)
	6-346, gnl\|Mm7\|chr11 (99712003-99711683)