Non-Coding RNA Search

Ss1.1-rnep28c_j18.5

Sequence:


               
               GAGCCAATGCCGCCGCCACTGCCACGCTTCCGAGTGGGGGCGGGCTGCTGCTCTTACTCT
ATGAGGCCAGCACTGCCCGCCCCCGGGCGCCACCGTGTCTGCTGCGCTGCGCTGCGTTGC
GCTGGCTGGGCGCTGAGCTGTCTGCTGCTGGGGCTGCGGTGGTTGGTTGGGAGGAGTGGG
GGTCTGGGGACACAGGTGAGTTGGGGGGGTGGCTGGCTGGTGGAGGGGGCTCCAGGTGAG
TATTCCAGGGGCCAGAGACAGCGGGGACGGTTCCTCTCCTGTCCTGCCCCGCCACCTGTC
TCATCCTTCCCTTTGTCTTTCCAGATCCAGAAGATGAAAGAAGAAAGTGACCAGTCCTAC
TGCCCCCTCCACCCTCATAGTGATGCATCTTCAGCCAGAGCTGTGGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGCCAATGCCGCCGCCACTGCCACGCTTCCGAGTGGGGGCGGGCTGCTGCTCTTACTCT
ATGAGGCCAGCACTGCCCGCCCCCGGGCGCCACCGTGTCTGCTGCGCTGCGCTGCGTTGC
GCTGGCTGGGCGCTGAGCTGTCTGCTGCTGGGGCTGCGGTGGTTGGTTGGGAGGAGTGGG
GGTCTGGGGACACAGGTGAGTTGGGGGGGTGGCTGGCTGGTGGAGGGGGCTCCAGGTGAG
TATTCCAGGGGCCAGAGACAGCGGGGACGGTTCCTCTCCTGTCCTGCCCCGCCACCTGTC
TCATCCTTCCCTTTGTCTTTCCAGATCCAGAAGATGAAAGAAGAAAGTGACCAGTCCTAC
TGCCCCCTCCACCCTCATAGTGATGCATCTTCAGCCAGAGCTGTGGCA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               84-408, gnl|bosTau2|chr25 (24878763-24878429)
               

               
               84-408, gnl|Hg17|chr16 (28822738-28823089)
               

               
               84-408, gnl|Mm7|chr7 (122542940-122542596)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               84-408, gnl|bosTau2|chr25 (24878763-24878429)
               

               
               84-408, gnl|Hg17|chr16 (28822738-28823089)
               

               
               84-408, gnl|Mm7|chr7 (122542940-122542596)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               mas (0.210305)
               

               
               nep (0.183925)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mas (0.210305)
               

               
               nep (0.183925)

	84-408, gnl\|bosTau2\|chr25 (24878763-24878429)
	84-408, gnl\|Hg17\|chr16 (28822738-28823089)
	84-408, gnl\|Mm7\|chr7 (122542940-122542596)