Ss1.1-rnep29c_c20.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAATATATTCCTACAGTATGCCAGTACTGAGGTTGATGGAGAACATTACATGACCCCAGA AGACTTTGTCCAACGCTATCTTGGGCTGTATAATGATCCAAATAGCAATCCAAAGATTGT GCAGCTCTTGGCAGGTGTAGCTGATCAAACCAAGGATGGATTGATCTCCTATCAAGAATT TTGGGCATTTGAATCTGTTTTATGTGCTCCAGATTCCATGTTCATAGTGGCTTTCCAATT ATTTGACAAGAGTGGAAATGGAGAGGTGACGTTTGAAAATGTCAAAGAAATTTTTGGACA GACAATTATTCATCATCATATTCCTTTTAACTGGGACTGTGAATTTATCCGGCTACATTT TGGGCATAATCGAAAGAAGCATCTTAACTACACAGAATTCACACAGTTTCTTCAGGAACT GCAGTTGGAACATGCGAGACAAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAATATATTCCTACAGTATGCCAGTACTGAGGTTGATGGAGAACATTACATGACCCCAGA AGACTTTGTCCAACGCTATCTTGGGCTGTATAATGATCCAAATAGCAATCCAAAGATTGT GCAGCTCTTGGCAGGTGTAGCTGATCAAACCAAGGATGGATTGATCTCCTATCAAGAATT TTGGGCATTTGAATCTGTTTTATGTGCTCCAGATTCCATGTTCATAGTGGCTTTCCAATT ATTTGACAAGAGTGGAAATGGAGAGGTGACGTTTGAAAATGTCAAAGAAATTTTTGGACA GACAATTATTCATCATCATATTCCTTTTAACTGGGACTGTGAATTTATCCGGCTACATTT TGGGCATAATCGAAAGAAGCATCTTAACTACACAGAATTCACACAGTTTCTTCAGGAACT GCAGTTGGAACATGCGAGACAAGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 15-159, gnl|bosTau2|chr2 (17795046-17795190) | |
| 15-159, gnl|canFam2|chr36 (19287061-19287228) | |
| 15-159, gnl|danRer3|chrNA (12676905-12676722) | |
| 15-159, gnl|dasNov1|scaffold_2792 (92442-92615) | |
| 15-159, gnl|echTel1|scaffold_313793 (3918-3748) | |
| 15-159, gnl|fr1|chrUn (7307127-7307290) | |
| 15-159, gnl|galGal2|chr7 (18655884-18655692) | |
| 15-159, gnl|hg17|chr2 (172550686-172550858) | |
| 15-159, gnl|Hg17|chr2 (172550842-172550698) | |
| 15-159, gnl|loxAfr1|scaffold_63545 (6436-6608) | |
| 15-159, gnl|mm7|chr2 (71187587-71187759) | |
| 15-159, gnl|Mm7|chr2 (71187744-71187600) | |
| 15-159, gnl|monDom2|scaffold_2 (70611604-70611781) | |
| 15-159, gnl|oryCun1|scaffold_173551 (40892-40723) | |
| 15-159, gnl|panTro1|chr13 (62193405-62193577) | |
| 15-159, gnl|rheMac2|chr12 (35507317-35507489) | |
| 15-159, gnl|rn3|chr3 (53537810-53537981) | |
| 15-159, gnl|tetNig1|chr2 (11441489-11441327) | |
| 15-159, gnl|xenTro1|scaffold_65 (1869399-1869214) | |
| 275-416, gnl|bosTau2|chr2 (17819118-17819259) | |
| 275-416, gnl|canFam2|chr36 (19267326-19267495) | |
| 275-416, gnl|danRer3|chr19 (60853654-60853816) | |
| 275-416, gnl|dasNov1|scaffold_2792 (62617-62786) | |
| 275-416, gnl|echTel1|scaffold_318705 (47896-47727) | |
| 275-416, gnl|fr1|chrUn (7303568-7303724) | |
| 275-416, gnl|galGal2|chr7 (18670182-18670015) | |
| 275-416, gnl|hg17|chr2 (172526385-172526554) | |
| 275-416, gnl|Hg17|chr2 (172526526-172526385) | |
| 275-416, gnl|loxAfr1|scaffold_124590 (6050-5868) | |
| 275-416, gnl|mm7|chr2 (71167685-71167854) | |
| 275-416, gnl|Mm7|chr2 (71167826-71167685) | |
| 275-416, gnl|monDom2|scaffold_2 (70593776-70593942) | |
| 275-416, gnl|oryCun1|scaffold_109372 (3964-4133) | |
| 275-416, gnl|panTro1|chr13 (62171039-62171208) | |
| 275-416, gnl|rheMac2|chr12 (35484595-35484764) | |
| 275-416, gnl|rn3|chr3 (53516531-53516700) | |
| 275-416, gnl|tetNig1|chr2 (11444615-11444459) | |
| 275-416, gnl|xenTro1|scaffold_65 (1874899-1874732) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 15-159, gnl|bosTau2|chr2 (17795046-17795190) | |
| 15-159, gnl|canFam2|chr36 (19287061-19287228) | |
| 15-159, gnl|danRer3|chrNA (12676905-12676722) | |
| 15-159, gnl|dasNov1|scaffold_2792 (92442-92615) | |
| 15-159, gnl|echTel1|scaffold_313793 (3918-3748) | |
| 15-159, gnl|fr1|chrUn (7307127-7307290) | |
| 15-159, gnl|galGal2|chr7 (18655884-18655692) | |
| 15-159, gnl|hg17|chr2 (172550686-172550858) | |
| 15-159, gnl|Hg17|chr2 (172550842-172550698) | |
| 15-159, gnl|loxAfr1|scaffold_63545 (6436-6608) | |
| 15-159, gnl|mm7|chr2 (71187587-71187759) | |
| 15-159, gnl|Mm7|chr2 (71187744-71187600) | |
| 15-159, gnl|monDom2|scaffold_2 (70611604-70611781) | |
| 15-159, gnl|oryCun1|scaffold_173551 (40892-40723) | |
| 15-159, gnl|panTro1|chr13 (62193405-62193577) | |
| 15-159, gnl|rheMac2|chr12 (35507317-35507489) | |
| 15-159, gnl|rn3|chr3 (53537810-53537981) | |
| 15-159, gnl|tetNig1|chr2 (11441489-11441327) | |
| 15-159, gnl|xenTro1|scaffold_65 (1869399-1869214) | |
| 275-416, gnl|bosTau2|chr2 (17819118-17819259) | |
| 275-416, gnl|canFam2|chr36 (19267326-19267495) | |
| 275-416, gnl|danRer3|chr19 (60853654-60853816) | |
| 275-416, gnl|dasNov1|scaffold_2792 (62617-62786) | |
| 275-416, gnl|echTel1|scaffold_318705 (47896-47727) | |
| 275-416, gnl|fr1|chrUn (7303568-7303724) | |
| 275-416, gnl|galGal2|chr7 (18670182-18670015) | |
| 275-416, gnl|hg17|chr2 (172526385-172526554) | |
| 275-416, gnl|Hg17|chr2 (172526526-172526385) | |
| 275-416, gnl|loxAfr1|scaffold_124590 (6050-5868) | |
| 275-416, gnl|mm7|chr2 (71167685-71167854) | |
| 275-416, gnl|Mm7|chr2 (71167826-71167685) | |
| 275-416, gnl|monDom2|scaffold_2 (70593776-70593942) | |
| 275-416, gnl|oryCun1|scaffold_109372 (3964-4133) | |
| 275-416, gnl|panTro1|chr13 (62171039-62171208) | |
| 275-416, gnl|rheMac2|chr12 (35484595-35484764) | |
| 275-416, gnl|rn3|chr3 (53516531-53516700) | |
| 275-416, gnl|tetNig1|chr2 (11444615-11444459) | |
| 275-416, gnl|xenTro1|scaffold_65 (1874899-1874732) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.551775) |