Non-Coding RNA Search

Ss1.1-rnep30c_d9.5

Sequence:


               
               GCGAGTTACTCGTAGCTCTCCATCTGGCACCATGTCCTTCAACTGCTCCCCGAGAAACTG
CTCTTCCAGGATCATCCCAGTGGCCCCCATTGCCACCTCTTCTGCCCAGGATGCCGACTG
CCTGAGTGGCATTTATCTGCCCAGCTCCTTCCAGACTGGCTCCTGGCTCCTGGATCACTG
TCAGGAGACCTGCTGCGAGCCCACTGTTTGCCAGCCAACCTGCTACCAGCAAACGTCTTG
TGTCTCCAGCCCTGTCCAGGTGACCTGCTCCCGGCAGACCACCTGCGTCTCTAATCCCTG
CTCAACTCCCTGCAGCCGGCCACTCACCTTTGTCTCCAGTGGCTGTCAGCCCGTGAGTGG
CATCTCTACTGTCTGCCAACCAGTGAGAAGAGTGTCCACTGTCTGCCAGCCAGTGGGAGG
AGTCTCCACCATCTGCCAGCCGGCTTATGGGGTCTCCAGAACGTACCAGCAGTCCTGTGT
GTCCAGCTGCCGAAGAACTTGCTAAGTGTGCAGGAGCCTGTGAGCGAAGCAAGACTCCAT
GACCTGCCAGCTGTGTTTCCAGTTCTTCCAACATGCTGCCTGTCCCTGAATAACTCTTCA
TGGCTGACCCCTATTCTAACTGCCTGATGGCTGGCTGCCAGCCCCAAATAAGCTGCCTTT
GGCAATCTAAGATTTTTTTCTGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGAGTTACTCGTAGCTCTCCATCTGGCACCATGTCCTTCAACTGCTCCCCGAGAAACTG
CTCTTCCAGGATCATCCCAGTGGCCCCCATTGCCACCTCTTCTGCCCAGGATGCCGACTG
CCTGAGTGGCATTTATCTGCCCAGCTCCTTCCAGACTGGCTCCTGGCTCCTGGATCACTG
TCAGGAGACCTGCTGCGAGCCCACTGTTTGCCAGCCAACCTGCTACCAGCAAACGTCTTG
TGTCTCCAGCCCTGTCCAGGTGACCTGCTCCCGGCAGACCACCTGCGTCTCTAATCCCTG
CTCAACTCCCTGCAGCCGGCCACTCACCTTTGTCTCCAGTGGCTGTCAGCCCGTGAGTGG
CATCTCTACTGTCTGCCAACCAGTGAGAAGAGTGTCCACTGTCTGCCAGCCAGTGGGAGG
AGTCTCCACCATCTGCCAGCCGGCTTATGGGGTCTCCAGAACGTACCAGCAGTCCTGTGT
GTCCAGCTGCCGAAGAACTTGCTAAGTGTGCAGGAGCCTGTGAGCGAAGCAAGACTCCAT
GACCTGCCAGCTGTGTTTCCAGTTCTTCCAACATGCTGCCTGTCCCTGAATAACTCTTCA
TGGCTGACCCCTATTCTAACTGCCTGATGGCTGGCTGCCAGCCCCAAATAAGCTGCCTTT
GGCAATCTAAGATTTTTTTCTGGC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|55658324|ref|XP_525504.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|55658324|ref|XP_525504.1|

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               3-675, gnl|bosTau2|chr1 (4185837-4185164)
               

               
               3-675, gnl|Hg17|chr21 (31175743-31175050)
               

               
               3-675, gnl|Mm7|chr16 (89621086-89620346)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-675, gnl|bosTau2|chr1 (4185837-4185164)
               

               
               3-675, gnl|Hg17|chr21 (31175743-31175050)
               

               
               3-675, gnl|Mm7|chr16 (89621086-89620346)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               nep (0.919625)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.919625)

	3-675, gnl\|bosTau2\|chr1 (4185837-4185164)
	3-675, gnl\|Hg17\|chr21 (31175743-31175050)
	3-675, gnl\|Mm7\|chr16 (89621086-89620346)