Non-Coding RNA Search

Ss1.1-rnep33c_m12.5

Sequence:


               
               GACATCGAGATCGCCACCTACCGGCGCCTGCTGGAGGGCGAGGAGCAGAGGCTGTGCGAA
GGCGTGGGCTCCGTGAATGTCTGCGTCAGCAGCTCCCGAGGTGGCATCGTCTGCGGAGAT
CTCTGCGCCTCCGGTGCTGCCCCTGCTGTCACCACCAGCGTCTGCAGCGCCCCCTGCAGC
GCCAACGTGGTGGTGGGCACCGCCAACGCCTGCAGCCCCTGCTCCGCGGTGGTCAGCAGC
AGCGTGGGCTGTAAGAGGTGCTAGGCTCGCTCTCTGCCCAGTCCAGACCTCACGCCACTG
GAACACCCCTCCCACTGTCCCACGAACCACCTGCCTCTGCGGAACCAGGGGCCAGATGGG
TACTCTCTGCCCATCCTCCACACCTGCTCCCTCTGTGTGCCATCCCCCAAGCGCCTGAAC
TCCGAGGAGGCTGGGGTGCCCTTAGCCTCTTTCTGTAACCTTTCCTAGTAGCTGTTTTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACATCGAGATCGCCACCTACCGGCGCCTGCTGGAGGGCGAGGAGCAGAGGCTGTGCGAA
GGCGTGGGCTCCGTGAATGTCTGCGTCAGCAGCTCCCGAGGTGGCATCGTCTGCGGAGAT
CTCTGCGCCTCCGGTGCTGCCCCTGCTGTCACCACCAGCGTCTGCAGCGCCCCCTGCAGC
GCCAACGTGGTGGTGGGCACCGCCAACGCCTGCAGCCCCTGCTCCGCGGTGGTCAGCAGC
AGCGTGGGCTGTAAGAGGTGCTAGGCTCGCTCTCTGCCCAGTCCAGACCTCACGCCACTG
GAACACCCCTCCCACTGTCCCACGAACCACCTGCCTCTGCGGAACCAGGGGCCAGATGGG
TACTCTCTGCCCATCCTCCACACCTGCTCCCTCTGTGTGCCATCCCCCAAGCGCCTGAAC
TCCGAGGAGGCTGGGGTGCCCTTAGCCTCTTTCTGTAACCTTTCCTAGTAGCTGTTTTCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|912801|gb|AAB32813.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|912801|gb|AAB32813.1|

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               83-478, gnl|bosTau2|chr5 (19774241-19774636)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               83-478, gnl|bosTau2|chr5 (19774241-19774636)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nep (0.36785)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.36785)