Non-Coding RNA Search

Ss1.1-rnep34c_f19.5

Sequence:


               
               CACAAACACAGCTCCGCCACACACTCGCCCGGATACCATGTCTCTTCGATTTTCCAGCGG
ATCCAGGAGGGCCTGTCCTCGCCCCACCACAGCATCCGGATCGCTCAGGCTCTCCGGTGG
GGGAGCCAGCTTTGGGGCTGGAAATGCTTGCAGCATGCCTGGAATCGGAAGCAGTTTCTC
ATGTGCCTTTGGTGGCAGCACCTCGGGAGGCAATGGAGTCGGGGGCAATCCCTGCGCCGG
CTTCACTCTGAATGAGGGGGGCCTCCTTTCCGGCAACGAGAAGGTGACCATGCAGAACCT
CAATGACCGCCTGGCCTCCTACCTGGACAACGTGCGCGCCCTGGAGGAGGCCAACGCCGA
CCTGGAGCAGAAGATCAAGGGCTGGTATGAGAAATTTGGACCCGGTTCTTGCCGCGGTCT
TGATCACGATTACAGTAGATACTTCCCGATAATTGATGATCTTAAAAATCAGATCATTGC
TTCCACCACCAGCAATGCTAACGCTGTTCTACAGATCGATAATGCCAGGCTGACCGCTGA
TGACTTCAGACTCAAGTATGAGAATGAGCTGGCTCTGCACCAGAGCGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACAAACACAGCTCCGCCACACACTCGCCCGGATACCATGTCTCTTCGATTTTCCAGCGG
ATCCAGGAGGGCCTGTCCTCGCCCCACCACAGCATCCGGATCGCTCAGGCTCTCCGGTGG
GGGAGCCAGCTTTGGGGCTGGAAATGCTTGCAGCATGCCTGGAATCGGAAGCAGTTTCTC
ATGTGCCTTTGGTGGCAGCACCTCGGGAGGCAATGGAGTCGGGGGCAATCCCTGCGCCGG
CTTCACTCTGAATGAGGGGGGCCTCCTTTCCGGCAACGAGAAGGTGACCATGCAGAACCT
CAATGACCGCCTGGCCTCCTACCTGGACAACGTGCGCGCCCTGGAGGAGGCCAACGCCGA
CCTGGAGCAGAAGATCAAGGGCTGGTATGAGAAATTTGGACCCGGTTCTTGCCGCGGTCT
TGATCACGATTACAGTAGATACTTCCCGATAATTGATGATCTTAAAAATCAGATCATTGC
TTCCACCACCAGCAATGCTAACGCTGTTCTACAGATCGATAATGCCAGGCTGACCGCTGA
TGACTTCAGACTCAAGTATGAGAATGAGCTGGCTCTGCACCAGAGCGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               32-472, gnl|bosTau2|chr19 (33927402-33927836)
               

               
               32-472, gnl|Hg17|chr17 (36165071-36164621)
               

               
               32-472, gnl|Mm7|chr11 (99431936-99431514)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               32-472, gnl|bosTau2|chr19 (33927402-33927836)
               

               
               32-472, gnl|Hg17|chr17 (36165071-36164621)
               

               
               32-472, gnl|Mm7|chr11 (99431936-99431514)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nep (1.28747)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (1.28747)

	32-472, gnl\|bosTau2\|chr19 (33927402-33927836)
	32-472, gnl\|Hg17\|chr17 (36165071-36164621)
	32-472, gnl\|Mm7\|chr11 (99431936-99431514)