Ss1.1-rnep34c_i7.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCTAGTACTCCTTTTGGCCATGGTAGTAACCAGTCTGTTCGACACTTGAAGTACTCCTTG TTTAAGAAGTCGCTCCTGGGCAGTGTTTCAGATAACGGAATAGTAACCCTCTGGGATGTT AATAGTCAGAGTCCCTACCACAGCTTTGACAGTGCCCATAAAGCTCCCGCCTCAGCCATC GGTTTTTCTCCTGTCAATGAATTGCTATTTGTAACTATAGGCTTGGATAAAAGGATTATT CTTTATGATACTTCAAGTAAGAAGATAGTGAAAACGTTAGTAGCTGATGCTCCTCTAACG GCAGTAGATTTCATGCCTGATGGAGCCACTTTGGCTATTGGATCTTCCCGTGGGAAAATA TATCAGTATGATTTAAGGATGTTGAAATCACCAGTTAAAACCATCAGTGCACATAAGACA TCTGTGCAGTGTATAGCATTTCAGTACTCCACTGTTTTTTCTAAGTCAGGTTTAAATAAA GGCAGTTCAAATAAGCCCACAGCCGTGAACAAACGTGCTGTTAATGCGAGTGCTGCTAGT GGAGGAGGCCAGAATTCTGGAACTGTCAGAGAAGCAGCCACCGCCTCTGCTGCCACAGTT CTGCCACAGCCCACGACCGCCCCTGTGGGGAAAGGAAAGGTTGCTGTTCAAGACAAAGCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCTAGTACTCCTTTTGGCCATGGTAGTAACCAGTCTGTTCGACACTTGAAGTACTCCTTG TTTAAGAAGTCGCTCCTGGGCAGTGTTTCAGATAACGGAATAGTAACCCTCTGGGATGTT AATAGTCAGAGTCCCTACCACAGCTTTGACAGTGCCCATAAAGCTCCCGCCTCAGCCATC GGTTTTTCTCCTGTCAATGAATTGCTATTTGTAACTATAGGCTTGGATAAAAGGATTATT CTTTATGATACTTCAAGTAAGAAGATAGTGAAAACGTTAGTAGCTGATGCTCCTCTAACG GCAGTAGATTTCATGCCTGATGGAGCCACTTTGGCTATTGGATCTTCCCGTGGGAAAATA TATCAGTATGATTTAAGGATGTTGAAATCACCAGTTAAAACCATCAGTGCACATAAGACA TCTGTGCAGTGTATAGCATTTCAGTACTCCACTGTTTTTTCTAAGTCAGGTTTAAATAAA GGCAGTTCAAATAAGCCCACAGCCGTGAACAAACGTGCTGTTAATGCGAGTGCTGCTAGT GGAGGAGGCCAGAATTCTGGAACTGTCAGAGAAGCAGCCACCGCCTCTGCTGCCACAGTT CTGCCACAGCCCACGACCGCCCCTGTGGGGAAAGGAAAGGTTGCTGTTCAAGACAAAGCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 32-269, gnl|bosTau2|chr5 (37308674-37308437) | |
| 32-269, gnl|canFam2|chr15 (39576145-39576431) | |
| 32-269, gnl|danRer3|chr25 (11151368-11151635) | |
| 32-269, gnl|dasNov1|scaffold_24046 (11592-11876) | |
| 32-269, gnl|echTel1|scaffold_324835 (43976-44265) | |
| 32-269, gnl|fr1|chrUn (304361625-304361901) | |
| 32-269, gnl|galGal2|chr1 (42843990-42844251) | |
| 32-269, gnl|hg17|chr12 (95831186-95831474) | |
| 32-269, gnl|Hg17|chr12 (95831220-95831457) | |
| 32-269, gnl|loxAfr1|scaffold_15677 (27411-27679) | |
| 32-269, gnl|mm7|chr10 (92259829-92259556) | |
| 32-269, gnl|Mm7|chr10 (92259799-92259562) | |
| 32-269, gnl|monDom2|scaffold_34 (18871974-18871686) | |
| 32-269, gnl|oryCun1|scaffold_202076 (138552-138837) | |
| 32-269, gnl|panTro1|chr10 (98296572-98296860) | |
| 32-269, gnl|rheMac2|chr11 (98153436-98153724) | |
| 32-269, gnl|rn3|chr7 (29742252-29741971) | |
| 32-269, gnl|tetNig1|chr13 (11179566-11179827) | |
| 32-269, gnl|xenTro1|scaffold_747 (469831-469540) | |
| 464-660, gnl|bosTau2|chr5 (37303424-37303228) | |
| 464-660, gnl|canFam2|chr15 (39578236-39578635) | |
| 464-660, gnl|dasNov1|scaffold_24046 (13772-14170) | |
| 464-660, gnl|echTel1|scaffold_324835 (46553-46962) | |
| 464-660, gnl|hg17|chr12 (95833270-95833668) | |
| 464-660, gnl|Hg17|chr12 (95833442-95833638) | |
| 464-660, gnl|loxAfr1|scaffold_15677 (30589-30978) | |
| 464-660, gnl|mm7|chr10 (92257382-92256989) | |
| 464-660, gnl|Mm7|chr10 (92257215-92257019) | |
| 464-660, gnl|monDom2|scaffold_34 (18869884-18869470) | |
| 464-660, gnl|oryCun1|scaffold_202076 (140597-140988) | |
| 464-660, gnl|panTro1|chr10 (98298649-98299047) | |
| 464-660, gnl|rheMac2|chr11 (98155540-98155938) | |
| 464-660, gnl|rn3|chr7 (29740123-29739726) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 32-269, gnl|bosTau2|chr5 (37308674-37308437) | |
| 32-269, gnl|canFam2|chr15 (39576145-39576431) | |
| 32-269, gnl|danRer3|chr25 (11151368-11151635) | |
| 32-269, gnl|dasNov1|scaffold_24046 (11592-11876) | |
| 32-269, gnl|echTel1|scaffold_324835 (43976-44265) | |
| 32-269, gnl|fr1|chrUn (304361625-304361901) | |
| 32-269, gnl|galGal2|chr1 (42843990-42844251) | |
| 32-269, gnl|hg17|chr12 (95831186-95831474) | |
| 32-269, gnl|Hg17|chr12 (95831220-95831457) | |
| 32-269, gnl|loxAfr1|scaffold_15677 (27411-27679) | |
| 32-269, gnl|mm7|chr10 (92259829-92259556) | |
| 32-269, gnl|Mm7|chr10 (92259799-92259562) | |
| 32-269, gnl|monDom2|scaffold_34 (18871974-18871686) | |
| 32-269, gnl|oryCun1|scaffold_202076 (138552-138837) | |
| 32-269, gnl|panTro1|chr10 (98296572-98296860) | |
| 32-269, gnl|rheMac2|chr11 (98153436-98153724) | |
| 32-269, gnl|rn3|chr7 (29742252-29741971) | |
| 32-269, gnl|tetNig1|chr13 (11179566-11179827) | |
| 32-269, gnl|xenTro1|scaffold_747 (469831-469540) | |
| 464-660, gnl|bosTau2|chr5 (37303424-37303228) | |
| 464-660, gnl|canFam2|chr15 (39578236-39578635) | |
| 464-660, gnl|dasNov1|scaffold_24046 (13772-14170) | |
| 464-660, gnl|echTel1|scaffold_324835 (46553-46962) | |
| 464-660, gnl|hg17|chr12 (95833270-95833668) | |
| 464-660, gnl|Hg17|chr12 (95833442-95833638) | |
| 464-660, gnl|loxAfr1|scaffold_15677 (30589-30978) | |
| 464-660, gnl|mm7|chr10 (92257382-92256989) | |
| 464-660, gnl|Mm7|chr10 (92257215-92257019) | |
| 464-660, gnl|monDom2|scaffold_34 (18869884-18869470) | |
| 464-660, gnl|oryCun1|scaffold_202076 (140597-140988) | |
| 464-660, gnl|panTro1|chr10 (98298649-98299047) | |
| 464-660, gnl|rheMac2|chr11 (98155540-98155938) | |
| 464-660, gnl|rn3|chr7 (29740123-29739726) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) |