Non-Coding RNA Search

Ss1.1-rnje03c_f2.5

Sequence:


               
               TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGGTACATGCTAGATTTATTATAAGGGC
TTTGGACATTTCAGAAATTACTATTTCAAACTTACACTTAGTTCATTAAGTATGTGGTTC
AAATTGATCCACTTTATTTCTAAATAGAAAATGGTTAACAATTTAAGGCACTCATTATTA
AGCACATGACACACTCAATTTATTGATAAATAGTTGATAAAAGTACTTATTATGGGCTTT
ATAAAGTCATAGCATAATTGGGAAATGTGAGATTGGGTTAAATATGCAACAAATCTCAAA
AAACTACAGAGAACTTTCCAATGAGAACCAAAGGTCATGGCTTTGTCTCAACATGCATGG
CAGCAAATGATTCCAGAACAACACTGGTAAAACCAATCTCCCAATTTAAGGCAGTGCAGA
GGCCCATGATTAGTTGTTTTAAGGCAAAATCATATATTCTCATCAATGATGGTAGTAGAA
AAGCTCCTGAAAACATTTCTATAGCAAGCATGTACATATAGCTGGTGCCTAAATTTTGCG
GGCTACCTTAGTGTGATTTATGTGGAATGCTATGAACACATTTTTCAATACATACATTAC
AATAACTGAGTTATCGGTAATAATACATCACTCACAAAAATTTCAGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGGTACATGCTAGATTTATTATAAGGGC
TTTGGACATTTCAGAAATTACTATTTCAAACTTACACTTAGTTCATTAAGTATGTGGTTC
AAATTGATCCACTTTATTTCTAAATAGAAAATGGTTAACAATTTAAGGCACTCATTATTA
AGCACATGACACACTCAATTTATTGATAAATAGTTGATAAAAGTACTTATTATGGGCTTT
ATAAAGTCATAGCATAATTGGGAAATGTGAGATTGGGTTAAATATGCAACAAATCTCAAA
AAACTACAGAGAACTTTCCAATGAGAACCAAAGGTCATGGCTTTGTCTCAACATGCATGG
CAGCAAATGATTCCAGAACAACACTGGTAAAACCAATCTCCCAATTTAAGGCAGTGCAGA
GGCCCATGATTAGTTGTTTTAAGGCAAAATCATATATTCTCATCAATGATGGTAGTAGAA
AAGCTCCTGAAAACATTTCTATAGCAAGCATGTACATATAGCTGGTGCCTAAATTTTGCG
GGCTACCTTAGTGTGATTTATGTGGAATGCTATGAACACATTTTTCAATACATACATTAC
AATAACTGAGTTATCGGTAATAATACATCACTCACAAAAATTTCAGCA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               27-648, gnl|bosTau2|chr1 (80266320-80266921)
               

               
               27-648, gnl|Hg17|chr3 (142165803-142165208)
               

               
               27-648, gnl|Mm7|chr9 (96733744-96734328)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               27-648, gnl|bosTau2|chr1 (80266320-80266921)
               

               
               27-648, gnl|Hg17|chr3 (142165803-142165208)
               

               
               27-648, gnl|Mm7|chr9 (96733744-96734328)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               nje (0.16592)
               

               
               ret (0.128733)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nje (0.16592)
               

               
               ret (0.128733)

	27-648, gnl\|bosTau2\|chr1 (80266320-80266921)
	27-648, gnl\|Hg17\|chr3 (142165803-142165208)
	27-648, gnl\|Mm7\|chr9 (96733744-96734328)